On Sun, Apr 24, 2016 at 11:06:24PM +1000, Ben Woodcroft wrote: > * gnu/packages/python.scm (python-scikit-bio, python2-scikit-bio): > New variables.
Thanks! > + (arguments > + `(#:phases > + (modify-phases %standard-phases > + ;; Install procedure installs extraneous binaries. > + (add-after 'install 'remove-extraneous-files > + (lambda* (#:key outputs #:allow-other-keys) > + (let* ((out (assoc-ref outputs "out")) > + (bin (string-append out "/bin"))) > + (delete-file-recursively bin)) > + #t)) That's interesting. How are they extraneous? Would nobody want to use them? > + ;; Tests are intended to be run using 'make test' not 'setup.py > + ;; test', but there are many test failures anyway > + ;; e.g. https://github.com/biocore/scikit-bio/issues/1308. Run a > + ;; simple import test instead. > + (delete 'check) > + (add-after 'install 'check-after-install Are the tests broken, or does scikit-bio simply not work with the current version of pandas? More context: https://github.com/biocore/scikit-bio/pull/1325 > +(define-public python2-scikit-bio > + (let ((base (package-with-python2 > + (strip-python2-variant python-scikit-bio)))) > + (package > + (inherit base) > + (native-inputs > + (append (package-native-inputs base) > + `(("python2-setuptools" ,python2-setuptools) > + ("python2-mock" ,python2-mock))))))) Same suggestion as for python-natsort.
