Roel Janssen <r...@gnu.org> writes: > From 3ed14719121a952fca48a8ad3426588ebb58a130 Mon Sep 17 00:00:00 2001 > From: Roel Janssen <r...@gnu.org> > Date: Tue, 22 Mar 2016 15:57:33 +0100 > Subject: [PATCH 7/8] gnu: Add intervaltree.
> * gnu/packages/bioinformatics.scm (intervaltree): New variable. > --- > gnu/packages/bioinformatics.scm | 32 ++++++++++++++++++++++++++++++++ > 1 file changed, 32 insertions(+) > diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm > index 9cbde46..5a0eb16 100644 > --- a/gnu/packages/bioinformatics.scm > +++ b/gnu/packages/bioinformatics.scm > @@ -4985,3 +4985,35 @@ automatically handles index file generation and use.") > ;; this program is a submodule, is licensed MIT, which is the same as > ;; the Expat license. > (license (list license:gpl2 license:expat))))) > + > +(define-public intervaltree > + (let ((commit "dbb4c513d1ad3baac516fc1484c995daf9b42838")) > + (package > + (name "intervaltree") > + (version (string-append "0-1." (string-take commit 7))) > + (source (origin > + (method url-fetch) > + (uri (string-append > + "https://github.com/ekg/intervaltree/archive/"; commit > ".tar.gz")) > + (file-name (string-append name "-" version ".tar.gz")) > + (sha256 > + (base32 "19prwpn2wxsrijp5svfqvfcxl5nj7zdhm3jycd5kqhl9nifpmcks")))) > + (build-system gnu-build-system) > + (arguments > + `(#:phases > + (modify-phases %standard-phases > + (delete 'configure) ; There is no configure phase. > + (replace 'check > + (lambda _ > + (zero? (system* "./interval_tree_test")))) The indentation looks wrong here. Could you please double-check that you’re not using tabs? > + (replace 'install > + (lambda* (#:key outputs #:allow-other-keys) > + (let ((include (string-append (assoc-ref outputs "out") > + "/include/intervaltree"))) > + (install-file "IntervalTree.h" include))))))) > + (home-page "https://github.com/ekg/intervaltree/";) > + (synopsis "Minimal C++ interval tree implementation") > + (description "This library provides a basic implementation of an > interval > +tree using C++ templates, allowing the insertion of arbitrary types into the > +tree.") > + (license license:expat)))) The rest looks good to me. ~~ Ricardo
