>From fab3c04392c943d651c4fcc922bea878092ecab7 Mon Sep 17 00:00:00 2001
From: Roel Janssen <r...@gnu.org>
Date: Wed, 16 Mar 2016 10:27:48 +0100
Subject: [PATCH] gnu: Add r-dnacopy.
* gnu/packages/bioinformatics.scm (r-dnacopy): New variable.
---
gnu/packages/bioinformatics.scm | 23 +++++++++++++++++++++++
1 file changed, 23 insertions(+)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 4dd2ee6..762ce21 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -3847,6 +3847,29 @@ barplots or heatmaps.")
packages.")
(license license:artistic2.0)))
+(define-public r-dnacopy
+ (package
+ (name "r-dnacopy")
+ (version "1.44.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "DNAcopy" version))
+ (sha256
+ (base32
+ "1c1px4rbr36xx929hp59k7ca9k5ab66qmn8k63fk13278ncm6h66"))))
+ (properties
+ `((upstream-name . "DNAcopy")
+ (r-repository . bioconductor)))
+ (build-system r-build-system)
+ (inputs
+ `(("gfortran" ,gfortran)))
+ (home-page "bioconductor.org/packages/DNAcopy")
+ (synopsis "Implementation of a circular binary segmentation algorithm")
+ (description "This package implements the circular binary segmentation (CBS)
+algorithm to segment DNA copy number data and identify genomic regions with
+abnormal copy number.")
+ (license license:gpl2+)))
+
(define-public r-s4vectors
(package
(name "r-s4vectors")
--
2.5.0
Dear Guix,
I'd like to add DNAcopy -- a package for R.
I followed the indentation of the other R packages.
Kind regards,
Roel
