On Tue, Mar 08, 2016 at 06:55:15PM -0500, Leo Famulari wrote:
> Thanks again for putting such a complicated patch together! We will find
> the best way to add freebayes to the distribution :)

+1. Freebayes is (in my opinion) one of the best variant callers out
there, both for SNPs and somatic (i.e. cancer) and a true free
competitor to the not-so-free GATK caller. 

It is great to be able to deploy it with GNU Guix (I am using Roel's
package already).

Pj.

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