Hi Guix,
here’s the second batch of R packages to give us “devtools”. I noticed
that “git2r” contains *modified* sources of libgit2, so we cannot link
it against libgit2 itself.
The git2r README says this:
The libgit2 library has been modified, e.g. to use the R printing and
error routines, and to use runif instead of rand.
In other places it says that libgit2 was modified to build it as an R
package. As I don’t know what this means I’ve submitted a bug report to
ask if linking against an external libgit2 would be possible:
https://github.com/ropensci/git2r/issues/187
I also added a note to the package recipe stating that the package
contains modified sources of libgit2.
~~ Ricardo
>From 853cd47952dad86f69d7ed9389174cc77eed17e9 Mon Sep 17 00:00:00 2001
From: Ricardo Wurmus <ricardo.wur...@mdc-berlin.de>
Date: Wed, 11 Nov 2015 14:07:24 +0100
Subject: [PATCH 1/3] gnu: Add r-git2r.
* gnu/packages/statistics.scm (r-git2r): New variable.
---
gnu/packages/statistics.scm | 28 ++++++++++++++++++++++++++++
1 file changed, 28 insertions(+)
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index 9c277b4..870e41a 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -38,8 +38,10 @@
#:use-module (gnu packages pkg-config)
#:use-module (gnu packages python)
#:use-module (gnu packages readline)
+ #:use-module (gnu packages ssh)
#:use-module (gnu packages texlive)
#:use-module (gnu packages texinfo)
+ #:use-module (gnu packages tls)
#:use-module (gnu packages base)
#:use-module (gnu packages web)
#:use-module (gnu packages xml)
@@ -1189,3 +1191,29 @@ demands of modern web APIs. It provides useful tools for working with HTTP
organised by HTTP verbs (@code{GET()}, @code{POST()}, etc). Configuration
functions make it easy to control additional request components.")
(license license:expat)))
+
+(define-public r-git2r
+ (package
+ (name "r-git2r")
+ (version "0.11.0")
+ (source (origin
+ (method url-fetch)
+ (uri (cran-uri "git2r" version))
+ (sha256
+ (base32
+ "1h5ag8sm512jsn2sp4yhiqspc7hjq5y8z0kqz24sdznxa3b7rpn9"))))
+ (build-system r-build-system)
+ ;; This R package contains modified sources of libgit2. This modified
+ ;; version of libgit2 is built as the package is built. Hence libgit2 is
+ ;; not among the inputs of this package.
+ (inputs
+ `(("libssh2" ,libssh2)
+ ("openssl" ,openssl)
+ ("zlib" ,zlib)))
+ (home-page "https://github.com/ropensci/git2r";)
+ (synopsis "Access git repositories with R")
+ (description
+ "This package provides an R interface to the libgit2 library, which is a
+pure C implementation of the Git core methods.")
+ ;; GPLv2 only with linking exception.
+ (license license:gpl2)))
--
2.1.0
>From a8df74bb8cfc34b5ea0f62b56f8fa9ede46c622c Mon Sep 17 00:00:00 2001
From: Ricardo Wurmus <ricardo.wur...@mdc-berlin.de>
Date: Wed, 11 Nov 2015 14:07:47 +0100
Subject: [PATCH 2/3] gnu: Add r-rstudioapi.
* gnu/packages/statistics.scm (r-rstudioapi): New variable.
---
gnu/packages/statistics.scm | 18 ++++++++++++++++++
1 file changed, 18 insertions(+)
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index 870e41a..fd0434d 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -1217,3 +1217,21 @@ functions make it easy to control additional request components.")
pure C implementation of the Git core methods.")
;; GPLv2 only with linking exception.
(license license:gpl2)))
+
+(define-public r-rstudioapi
+ (package
+ (name "r-rstudioapi")
+ (version "0.3.1")
+ (source (origin
+ (method url-fetch)
+ (uri (cran-uri "rstudioapi" version))
+ (sha256
+ (base32
+ "0q7671d924nzqsqhs8d9p7l907bcam56wjwm7vvz44xgj0saj8bs"))))
+ (build-system r-build-system)
+ (home-page "http://cran.r-project.org/web/packages/rstudioapi";)
+ (synopsis "Safely access the RStudio API")
+ (description
+ "This package provides functions to access the RStudio API and provide
+informative error messages when it's not available.")
+ (license license:expat)))
--
2.1.0
>From 9491af491f85afe7f317309946cea34f63af8221 Mon Sep 17 00:00:00 2001
From: Ricardo Wurmus <ricardo.wur...@mdc-berlin.de>
Date: Wed, 11 Nov 2015 14:08:46 +0100
Subject: [PATCH 3/3] gnu: Add r-devtools.
* gnu/packages/statistics.scm (r-devtools): New variable.
---
gnu/packages/statistics.scm | 29 +++++++++++++++++++++++++++++
1 file changed, 29 insertions(+)
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index fd0434d..478338f 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -1235,3 +1235,32 @@ pure C implementation of the Git core methods.")
"This package provides functions to access the RStudio API and provide
informative error messages when it's not available.")
(license license:expat)))
+
+(define-public r-devtools
+ (package
+ (name "r-devtools")
+ (version "1.9.1")
+ (source (origin
+ (method url-fetch)
+ (uri (cran-uri "devtools" version))
+ (sha256
+ (base32
+ "10ycx3kkiz5x8nmgw31d9wa5hhlx2fhda2nqzxfrczqpz1jik6ci"))))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-curl" ,r-curl)
+ ("r-digest" ,r-digest)
+ ("r-evaluate" ,r-evaluate)
+ ("r-git2r" ,r-git2r)
+ ("r-httr" ,r-httr)
+ ("r-jsonlite" ,r-jsonlite)
+ ("r-memoise" ,r-memoise)
+ ("r-roxygen2" ,r-roxygen2)
+ ("r-rstudioapi" ,r-rstudioapi)
+ ("r-rversions" ,r-rversions)
+ ("r-whisker" ,r-whisker)))
+ (home-page "https://github.com/hadley/devtools";)
+ (synopsis "Tools to make developing R packages easier")
+ (description "The devtools package is a collection of package development
+tools to simplify the devolpment of R packages.")
+ (license license:gpl2+)))
--
2.1.0
