Ben Woodcroft <b.woodcr...@uq.edu.au> skribis:
> From e1789cbcfcf7dc6f1657f53bad04fca7180400cc Mon Sep 17 00:00:00 2001
> From: Ben Woodcroft <donttrust...@gmail.com>
> Date: Tue, 29 Sep 2015 22:10:33 +1000
> Subject: [PATCH 1/2] gnu: Add cityhash.
>
> * gnu/packages/textutils.scm (cityhash): New variable.
Applied. I removed “A” from the synopsis as suggested by ‘guix lint’.
> From 5a403f43bafe129d8a22b1d0ea169c2e97d2fb5b Mon Sep 17 00:00:00 2001
> From: Ben Woodcroft <donttrust...@gmail.com>
> Date: Wed, 30 Sep 2015 18:35:32 +1000
> Subject: [PATCH 2/2] gnu: Add vsearch.
>
> * gnu/packages/bioinformatics.scm (vsearch): New variable.
[...]
> + ;; Remove bundled cityhash
> + (substitute* "src/Makefile.am"
> + (((string-append "^AM_CXXFLAGS=-I\\$\\{srcdir\\}/cityhash"
> + " -O3 -mtune=native -Wall -Wsign-compare"))
> + (string-append "AM_CXXFLAGS=-lcityhash"
> + " -O3 -mtune=native -Wall -Wsign-compare"))
I changed that to remove -mtune=native, which would produce binaries
that can only work on the build machine, and to use a string literal for
the pattern.
Thanks!
Ludo’.
