Hi Jochen,

Thanks for you help. I attached one file of the configuration - The 
configuration is the same in all 3 Graylog machines in our cluster (except 
is_master parameter and the IP parameter).
I also attached one file of the logs, again - same logs are all around the 
cluster (except the master periodical duties).

Our cluster:
3 Amazon instances, each one sized as m4.2xlarge - 8 cores and 32GB mem. 
With Disks of 2.5TB.

Let me know if you need anything else!

Nitzan

On Thursday, February 2, 2017 at 6:38:57 PM UTC+2, Jochen Schalanda wrote:
>
> Hi Nitzan,
>
> please post the configuration and logs of all Graylog nodes and a 
> description of your hardware.
>
> Cheers,
> Jochen
>
> On Thursday, 2 February 2017 17:18:12 UTC+1, Nitzan Haimovich wrote:
>>
>> Hi all,
>>
>> I'm getting this message (*Nodes with too long GC pauses*) on my Graylog 
>> cluster. I saw many people were posting about it but not a single thread 
>> with solutions for how to solve/fix/approach it.
>> I would be glad for any help.
>>
>> My cluster - 3 Graylog instances, each one with 8 cores and 16GB memory 
>> (heap size is configured to be : Xms - 1GB , Xmx - 8GB).
>> If you need any more details please let me know.
>>
>> Thanks!!
>>
>> Nitzan
>>
>

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############################
# GRAYLOG CONFIGURATION FILE
############################

# If you are running more than one instances of Graylog server you have to 
select one of these
# instances as master. The master will perform some periodical tasks that 
non-masters won't perform.
is_master = true

# The auto-generated node ID will be stored in this file and read after 
restarts. It is a good idea
# to use an absolute file path here if you are starting Graylog server from 
init scripts or similar.
node_id_file = /etc/graylog/server/node-id

# You MUST set a secret to secure/pepper the stored user passwords here. Use at 
least 64 characters.
# Generate one by using for example: pwgen -N 1 -s 96
password_secret = $SECRET

# You MUST specify a hash password for the root user (which you only need to 
initially set up the
# system and in case you lose connectivity to your authentication backend)
# This password cannot be changed using the API or via the web interface. If 
you need to change it,
# modify it in this file.
# Create one by using for example: echo -n yourpassword | shasum -a 256
# and put the resulting hash value into the following line
root_password_sha2 = $PASS_SHA

# The time zone setting of the root user. See 
http://www.joda.org/joda-time/timezones.html for a list of valid time zones.
# Default is UTC
root_timezone = Asia/Jerusalem

# Set plugin directory here (relative or absolute)
plugin_dir = /usr/share/graylog-server/plugin

# REST API listen URI. Must be reachable by other Graylog server nodes if you 
run a cluster.
# When using Graylog Collectors, this URI will be used to receive heartbeat 
messages and must be accessible for all collectors.
rest_listen_uri = http://0.0.0.0:12900/

# REST API transport address. Defaults to the value of rest_listen_uri. 
Exception: If rest_listen_uri
# is set to a wildcard IP address (0.0.0.0) the first non-loopback IPv4 system 
address is used.
# If set, this will be promoted in the cluster discovery APIs, so other nodes 
may try to connect on
# this address and it is used to generate URLs addressing entities in the REST 
API. (see rest_listen_uri)
# You will need to define this, if your Graylog server is running behind a HTTP 
proxy that is rewriting
# the scheme, host name or URI.
# This must not contain a wildcard address (0.0.0.0).
rest_transport_uri = http://$IP:12900/

# Enable CORS headers for REST API. This is necessary for JS-clients accessing 
the server directly.
# If these are disabled, modern browsers will not be able to retrieve resources 
from the server.
# This is enabled by default. Uncomment the next line to disable it.
rest_enable_cors = true

# Enable HTTPS support for the REST API. This secures the communication with 
the REST API with
# TLS to prevent request forgery and eavesdropping. This is disabled by 
default. Uncomment the
# next line to enable it.
#rest_enable_tls = true

# The X.509 certificate chain file in PEM format to use for securing the REST 
API.
#rest_tls_cert_file = /etc/graylog/server/domain.crt

# The PKCS#8 private key file in PEM format to use for securing the REST API.
#rest_tls_key_file = /etc/graylog/server/domain.key

# Web interface listen URI.
# Configuring a path for the URI here effectively prefixes all URIs in the web 
interface. This is a replacement
# for the application.context configuration parameter in pre-2.0 versions of 
the Graylog web interface.
web_listen_uri = https://0.0.0.0:9000/

# Web interface endpoint URI. This setting can be overriden on a per-request 
basis with the X-Graylog-Server-URL header.
# Default: $rest_transport_uri
web_endpoint_uri = https://$DNS/

# Enable CORS headers for the web interface. This is necessary for JS-clients 
accessing the server directly.
# If these are disabled, modern browsers will not be able to retrieve resources 
from the server.
web_enable_cors = true

# Enable HTTPS support for the web interface. This secures the communication of 
the web browser with the web interface
# using TLS to prevent request forgery and eavesdropping.
# This is disabled by default. Uncomment the next line to enable it and see the 
other related configuration settings.
web_enable_tls = true

# The X.509 certificate chain file in PEM format to use for securing the web 
interface.
web_tls_cert_file = /etc/graylog/server/domain.crt

# The PKCS#8 private key file in PEM format to use for securing the web 
interface.
web_tls_key_file = /etc/graylog/server/domain.key

#########################################################################
# Configuration file for the embedded Elasticsearch instance in Graylog #
#########################################################################
# Pay attention to the working directory of the server, maybe use an absolute 
path here.
# Default: empty
#elasticsearch_config_file = /etc/graylog/server/elasticsearch.yml

# Graylog will use multiple indices to store documents in. You can configured 
the strategy it uses to determine
# when to rotate the currently active write index.
# It supports multiple rotation strategies:
#   - "count" of messages per index, use elasticsearch_max_docs_per_index below 
to configure
#   - "size" per index, use elasticsearch_max_size_per_index below to configure
# valid values are "count", "size" and "time", default is "count"
rotation_strategy = size

# (Approximate) maximum size in bytes per Elasticsearch index on disk before a 
new index is being created, also see
# no_retention and elasticsearch_max_number_of_indices. Default is 1GB.
# Configure this if you used 'rotation_strategy = size' above.
elasticsearch_max_size_per_index = 10737418240

# How many indices do you want to keep?
elasticsearch_max_number_of_indices = 150

# Decide what happens with the oldest indices when the maximum number of 
indices is reached.
# The following strategies are availble:
#   - delete # Deletes the index completely (Default)
#   - close # Closes the index and hides it from the system. Can be re-opened 
later.
retention_strategy = close

# How many Elasticsearch shards and replicas should be used per index? Note 
that this only applies to newly created indices.
elasticsearch_shards = 6
elasticsearch_replicas = 1

# Prefix for all Elasticsearch indices and index aliases managed by Graylog.
elasticsearch_index_prefix = graylog

# Do you want to allow searches with leading wildcards? This can be extremely 
resource hungry and should only
# be enabled with care. See also: 
http://docs.graylog.org/en/2.1/pages/queries.html
allow_leading_wildcard_searches = false

# Do you want to allow searches to be highlighted? Depending on the size of 
your messages this can be memory hungry and
# should only be enabled after making sure your Elasticsearch cluster has 
enough memory.
allow_highlighting = false

# settings to be passed to elasticsearch's client (overriding those in the 
provided elasticsearch_config_file)
# this must be the same as for your Elasticsearch cluster
elasticsearch_cluster_name = elasticsearch-graylog

# The prefix being used to generate the Elasticsearch node name which makes it 
easier to identify the specific Graylog
# server running the embedded Elasticsearch instance. The node name will be 
constructed by concatenating this prefix
# and the Graylog node ID (see node_id_file), for example 
"graylog-17052010-1234-5678-abcd-1337cafebabe".
# Default: graylog-
elasticsearch_node_name_prefix = graylog-

# A comma-separated list of Elasticsearch nodes which Graylog is using to 
connect to the Elasticsearch cluster,
# see 
https://www.elastic.co/guide/en/elasticsearch/reference/2.3/modules-discovery-zen.html
 for details.
# Default: 127.0.0.1
elasticsearch_discovery_zen_ping_unicast_hosts = $ES_DNS:9300

# use a different port if you run multiple Elasticsearch nodes on one machine
elasticsearch_transport_tcp_port = 9350

# Change the following setting if you are running into problems with timeouts 
during Elasticsearch cluster discovery.
# The setting is specified in milliseconds, the default is 5000ms (5 seconds).
#elasticsearch_cluster_discovery_timeout = 5000

# the following settings allow to change the bind addresses for the 
Elasticsearch client in Graylog
# these settings are empty by default, letting Elasticsearch choose 
automatically,
# override them here or in the 'elasticsearch_config_file' if you need to bind 
to a special address
# refer to 
https://www.elastic.co/guide/en/elasticsearch/reference/2.3/modules-network.html
# for special values here
elasticsearch_network_host = 0.0.0.0
#elasticsearch_network_bind_host =
#elasticsearch_network_publish_host =

# Analyzer (tokenizer) to use for message and full_message field. The 
"standard" filter usually is a good idea.
# All supported analyzers are: standard, simple, whitespace, stop, keyword, 
pattern, language, snowball, custom
# Elasticsearch documentation: 
https://www.elastic.co/guide/en/elasticsearch/reference/2.3/analysis.html
# Note that this setting only takes effect on newly created indices.
elasticsearch_analyzer = standard

# Global request timeout for Elasticsearch requests (e. g. during search, index 
creation, or index time-range
# calculations) based on a best-effort to restrict the runtime of Elasticsearch 
operations.
# Default: 1m
#elasticsearch_request_timeout = 1m

# Time interval for index range information cleanups. This setting defines how 
often stale index range information
# is being purged from the database.
# Default: 1h
#index_ranges_cleanup_interval = 1h

# Batch size for the Elasticsearch output. This is the maximum (!) number of 
messages the Elasticsearch output
# module will get at once and write to Elasticsearch in a batch call. If the 
configured batch size has not been
# reached within output_flush_interval seconds, everything that is available 
will be flushed at once. Remember
# that every outputbuffer processor manages its own batch and performs its own 
batch write calls.
# ("outputbuffer_processors" variable)
output_batch_size = 40000

# Flush interval (in seconds) for the Elasticsearch output. This is the maximum 
amount of time between two
# batches of messages written to Elasticsearch. It is only effective at all if 
your minimum number of messages
# for this time period is less than output_batch_size * outputbuffer_processors.
output_flush_interval = 1

# As stream outputs are loaded only on demand, an output which is failing to 
initialize will be tried over and
# over again. To prevent this, the following configuration options define after 
how many faults an output will
# not be tried again for an also configurable amount of seconds.
output_fault_count_threshold = 5
output_fault_penalty_seconds = 30

# The number of parallel running processors.
# Raise this number if your buffers are filling up.
processbuffer_processors = 30
outputbuffer_processors = 50

#outputbuffer_processor_keep_alive_time = 5000
#outputbuffer_processor_threads_core_pool_size = 3
#outputbuffer_processor_threads_max_pool_size = 30

# UDP receive buffer size for all message inputs (e. g. SyslogUDPInput).
#udp_recvbuffer_sizes = 1048576

# Wait strategy describing how buffer processors wait on a cursor sequence. 
(default: sleeping)
# Possible types:
#  - yielding
#     Compromise between performance and CPU usage.
#  - sleeping
#     Compromise between performance and CPU usage. Latency spikes can occur 
after quiet periods.
#  - blocking
#     High throughput, low latency, higher CPU usage.
#  - busy_spinning
#     Avoids syscalls which could introduce latency jitter. Best when threads 
can be bound to specific CPU cores.
processor_wait_strategy = blocking

# Size of internal ring buffers. Raise this if raising outputbuffer_processors 
does not help anymore.
# For optimum performance your LogMessage objects in the ring buffer should fit 
in your CPU L3 cache.
# Must be a power of 2. (512, 1024, 2048, ...)
ring_size = 262144

inputbuffer_ring_size = 131072
inputbuffer_processors = 2
inputbuffer_wait_strategy = blocking

# Enable the disk based message journal.
message_journal_enabled = true

# The directory which will be used to store the message journal. The directory 
must me exclusively used by Graylog and
# must not contain any other files than the ones created by Graylog itself.
#
# ATTENTION:
#   If you create a seperate partition for the journal files and use a file 
system creating directories like 'lost+found'
#   in the root directory, you need to create a sub directory for your journal.
#   Otherwise Graylog will log an error message that the journal is corrupt and 
Graylog will not start.
message_journal_dir = /var/lib/graylog-server/journal

# Journal hold messages before they could be written to Elasticsearch.
# For a maximum of 12 hours or 5 GB whichever happens first.
# During normal operation the journal will be smaller.
#message_journal_max_age = 12h
#message_journal_max_size = 10gb
#message_journal_flush_age = 30s
#message_journal_flush_interval = 18000
#message_journal_segment_age = 1h
#message_journal_segment_size = 800mb

# Number of threads used exclusively for dispatching internal events. Default 
is 2.
#async_eventbus_processors = 2

# How many seconds to wait between marking node as DEAD for possible load 
balancers and starting the actual
# shutdown process. Set to 0 if you have no status checking load balancers in 
front.
lb_recognition_period_seconds = 3

# Journal usage percentage that triggers requesting throttling for this server 
node from load balancers. The feature is
# disabled if not set.
lb_throttle_threshold_percentage = 98

# Every message is matched against the configured streams and it can happen 
that a stream contains rules which
# take an unusual amount of time to run, for example if its using regular 
expressions that perform excessive backtracking.
# This will impact the processing of the entire server. To keep such 
misbehaving stream rules from impacting other
# streams, Graylog limits the execution time for each stream.
# The default values are noted below, the timeout is in milliseconds.
# If the stream matching for one stream took longer than the timeout value, and 
this happened more than "max_faults" times
# that stream is disabled and a notification is shown in the web interface.
stream_processing_timeout = 5000
stream_processing_max_faults = 0

# Length of the interval in seconds in which the alert conditions for all 
streams should be checked
# and alarms are being sent.
#alert_check_interval = 60

# Since 0.21 the Graylog server supports pluggable output modules. This means a 
single message can be written to multiple
# outputs. The next setting defines the timeout for a single output module, 
including the default output module where all
# messages end up.
#
# Time in milliseconds to wait for all message outputs to finish writing a 
single message.
#output_module_timeout = 10000

# Time in milliseconds after which a detected stale master node is being 
rechecked on startup.
#stale_master_timeout = 2000

# Time in milliseconds which Graylog is waiting for all threads to stop on 
shutdown.
#shutdown_timeout = 30000

# MongoDB connection string for single instance
#mongodb_uri =

# MongoDB connection string for replica set
mongodb_uri = 
mongodb://$MONGO_USER:$MONGO_PASS@$MONGO_CLUSTER/$MONGO_DB_NAME?replicaSet=$REPLICA_SET

# Increase this value according to the maximum connections your MongoDB server 
can handle from a single client
# if you encounter MongoDB connection problems.
mongodb_max_connections = 1000

# Number of threads allowed to be blocked by MongoDB connections multiplier. 
Default: 5
# If mongodb_max_connections is 100, and 
mongodb_threads_allowed_to_block_multiplier is 5,
# then 500 threads can block. More than that and an exception will be thrown.
# 
http://api.mongodb.com/java/current/com/mongodb/MongoOptions.html#threadsAllowedToBlockForConnectionMultiplier
mongodb_threads_allowed_to_block_multiplier = 5

# Drools Rule File (Use to rewrite incoming log messages)
# See: http://docs.graylog.org/en/2.1/pages/drools.html
rules_file = /etc/graylog/server/rules.drl

# The default connect timeout for outgoing HTTP connections.
# Values must be a positive duration (and between 1 and 2147483647 when 
converted to milliseconds).
# Default: 5s
#http_connect_timeout = 5s

# The default read timeout for outgoing HTTP connections.
# Values must be a positive duration (and between 1 and 2147483647 when 
converted to milliseconds).
# Default: 10s
#http_read_timeout = 10s

# The default write timeout for outgoing HTTP connections.
# Values must be a positive duration (and between 1 and 2147483647 when 
converted to milliseconds).
# Default: 10s
#http_write_timeout = 10s

# HTTP proxy for outgoing HTTP connections
#http_proxy_uri =

# The threshold of the garbage collection runs. If GC runs take longer than 
this threshold, a system notification
# will be generated to warn the administrator about possible problems with the 
system. Default is 1 second.
#gc_warning_threshold = 1s

# The default cache time for dashboard widgets. (Default: 10 seconds, minimum: 
1 second)
#dashboard_widget_default_cache_time = 10s

# Automatically load content packs in "content_packs_dir" on the first start of 
Graylog.
content_packs_loader_enabled = true

# The directory which contains content packs which should be loaded on the 
first start of Graylog.
content_packs_dir = /usr/share/graylog-server/contentpacks

# A comma-separated list of content packs (files in "content_packs_dir") which 
should be applied on
# the first start of Graylog.
# Default: empty
content_packs_auto_load = grok-patterns.json
2017-02-01T06:04:33.165Z INFO  [CmdLineTool] Loaded plugin: 
OpsGenieAlarmCallback 1.0.0 
[com.opsgenie.plugin.graylog.OpsGenieAlarmCallbackPlugin]
2017-02-01T06:04:33.167Z INFO  [CmdLineTool] Loaded plugin: Elastic Beats Input 
2.2.0-beta.6 [org.graylog.plugins.beats.BeatsInputPlugin]
2017-02-01T06:04:33.168Z INFO  [CmdLineTool] Loaded plugin: Collector 
2.2.0-beta.6 [org.graylog.plugins.collector.CollectorPlugin]
2017-02-01T06:04:33.169Z INFO  [CmdLineTool] Loaded plugin: Enterprise 
Integration Plugin 2.2.0-beta.6 
[org.graylog.plugins.enterprise_integration.EnterpriseIntegrationPlugin]
2017-02-01T06:04:33.171Z INFO  [CmdLineTool] Loaded plugin: MapWidgetPlugin 
2.2.0-beta.6 [org.graylog.plugins.map.MapWidgetPlugin]
2017-02-01T06:04:33.172Z INFO  [CmdLineTool] Loaded plugin: Pipeline Processor 
Plugin 2.2.0-beta.6 [org.graylog.plugins.pipelineprocessor.ProcessorPlugin]
2017-02-01T06:04:33.173Z INFO  [CmdLineTool] Loaded plugin: Anonymous Usage 
Statistics 2.2.0-beta.6 [org.graylog.plugins.usagestatistics.UsageStatsPlugin]
2017-02-01T06:04:33.174Z INFO  [CmdLineTool] Loaded plugin: Slack 
2.2.0-SNAPSHOT [org.graylog2.plugins.slack.callback.SlackAlarmCallback]
2017-02-01T06:04:33.374Z INFO  [CmdLineTool] Running with JVM arguments: -Xms1g 
-Xmx16g -XX:+UseParNewGC -XX:-OmitStackTraceInFastThrow 
-Dlog4j.configurationFile=file:///etc/graylog/server/log4j2.xml 
-Djava.library.path=/usr/share/graylog-server/lib/sigar 
-Dgraylog2.installation_source=deb
2017-02-01T06:04:33.566Z INFO  [Version] HV000001: Hibernate Validator null
2017-02-01T06:04:35.744Z INFO  [InputBufferImpl] Message journal is enabled.
2017-02-01T06:04:35.770Z INFO  [NodeId] Node ID: 
f7636182-5b01-4fb6-965d-b904415109aa
2017-02-01T06:04:36.034Z INFO  [LogManager] Loading logs.
2017-02-01T06:04:36.038Z INFO  [LogManager] Logs loading complete.
2017-02-01T06:04:36.070Z INFO  [LogManager] Created log for partition 
[messagejournal,0] in /var/lib/graylog-server/journal with properties 
{file.delete.delay.ms -> 60000, compact -> false, max.message.bytes -> 
104857600, min.insync.replicas -> 1, segment.jitter.ms -> 0, 
index.interval.bytes -> 4096, min.cleanable.dirty.ratio -> 0.5, 
unclean.leader.election.enable -> true, retention.bytes -> 5368709120, 
delete.retention.ms -> 86400000, flush.ms -> 60000, segment.bytes -> 104857600, 
segment.ms -> 3600000, retention.ms -> 43200000, flush.messages -> 1000000, 
segment.index.bytes -> 1048576}.
2017-02-01T06:04:36.070Z INFO  [KafkaJournal] Initialized Kafka based journal 
at /var/lib/graylog-server/journal
2017-02-01T06:04:36.081Z INFO  [InputBufferImpl] Initialized InputBufferImpl 
with ring size <131072> and wait strategy <BlockingWaitStrategy>, running 2 
parallel message handlers.
2017-02-01T06:04:36.095Z INFO  [cluster] Cluster created with settings 
{hosts=[IP1:27017, IP2:27017, IP3:27017], mode=MULTIPLE, 
requiredClusterType=REPLICA_SET, serverSelectionTimeout='30000 ms', 
maxWaitQueueSize=5000, requiredReplicaSetName='REPLICA_NAME'}
2017-02-01T06:04:36.096Z INFO  [cluster] Adding discovered server IP1:27017 to 
client view of cluster
2017-02-01T06:04:36.119Z INFO  [cluster] Adding discovered server IP2:27017 to 
client view of cluster
2017-02-01T06:04:36.120Z INFO  [cluster] Adding discovered server IP3:27017 to 
client view of cluster
2017-02-01T06:04:36.143Z INFO  [cluster] No server chosen by 
ReadPreferenceServerSelector{readPreference=primary} from cluster description 
ClusterDescription{type=REPLICA_SET, connectionMode=MULTIPLE, 
serverDescriptions=[ServerDescription{address=IP1:27017, type=UNKNOWN, 
state=CONNECTING}, ServerDescription{address=IP2:27017, type=UNKNOWN, 
state=CONNECTING}, ServerDescription{address=IP3:27017, type=UNKNOWN, 
state=CONNECTING}]}. Waiting for 30000 ms before timing out
2017-02-01T06:04:36.160Z INFO  [connection] Opened connection 
[connectionId{localValue:3, serverValue:38653}] to IP1:27017
2017-02-01T06:04:36.161Z INFO  [connection] Opened connection 
[connectionId{localValue:2, serverValue:10338}] to IP2:27017
2017-02-01T06:04:36.162Z INFO  [cluster] Monitor thread successfully connected 
to server with description ServerDescription...
2017-02-01T06:04:36.162Z INFO  [cluster] Monitor thread successfully connected 
to server with description ServerDescription...
2017-02-01T06:04:36.164Z INFO  [connection] Opened connection 
[connectionId{localValue:1, serverValue:43114}] to IP3:27017
2017-02-01T06:04:36.166Z INFO  [cluster] Monitor thread successfully connected 
to server with description ServerDescription...
2017-02-01T06:04:36.167Z INFO  [cluster] Discovered replica set primary 
IP3:27017
2017-02-01T06:04:36.175Z INFO  [connection] Opened connection 
[connectionId{localValue:4, serverValue:43115}] to IP3:27017
2017-02-01T06:04:36.389Z INFO  [node] 
[graylog-f7636182-5b01-4fb6-965d-b904415109aa] version[2.4.3], pid[23243], 
build[d38a34e/2016-12-07T16:28:56Z]
2017-02-01T06:04:36.389Z INFO  [node] 
[graylog-f7636182-5b01-4fb6-965d-b904415109aa] initializing ...
2017-02-01T06:04:36.394Z INFO  [plugins] 
[graylog-f7636182-5b01-4fb6-965d-b904415109aa] modules [], plugins 
[graylog-monitor], sites []
2017-02-01T06:04:37.601Z INFO  [node] 
[graylog-f7636182-5b01-4fb6-965d-b904415109aa] initialized
2017-02-01T06:04:37.685Z INFO  [ProcessBuffer] Initialized ProcessBuffer with 
ring size <262144> and wait strategy <BlockingWaitStrategy>.
2017-02-01T06:04:39.316Z WARN  [DroolsEngine] Could not read drools source 
file. Not loading rules: /etc/graylog/server/rules.drl (No such file or 
directory)
2017-02-01T06:04:39.316Z WARN  [RulesEngineProvider] Unable to load rules due 
to load error: /etc/graylog/server/rules.drl
2017-02-01T06:04:39.557Z WARN  [GeoIpResolverEngine] GeoIP database file does 
not exist: /etc/graylog/server/GeoLite2-City.mmdb
2017-02-01T06:04:39.563Z INFO  [OutputBuffer] Initialized OutputBuffer with 
ring size <262144> and wait strategy <BlockingWaitStrategy>.
2017-02-01T06:04:39.705Z WARN  [GeoIpResolverEngine] GeoIP database file does 
not exist: /etc/graylog/server/GeoLite2-City.mmdb
2017-02-01T06:04:39.908Z WARN  [GeoIpResolverEngine] GeoIP database file does 
not exist: /etc/graylog/server/GeoLite2-City.mmdb
2017-02-01T06:04:40.026Z WARN  [GeoIpResolverEngine] GeoIP database file does 
not exist: /etc/graylog/server/GeoLite2-City.mmdb
2017-02-01T06:04:40.139Z WARN  [GeoIpResolverEngine] GeoIP database file does 
not exist: /etc/graylog/server/GeoLite2-City.mmdb
2017-02-01T06:04:40.258Z WARN  [GeoIpResolverEngine] GeoIP database file does 
not exist: /etc/graylog/server/GeoLite2-City.mmdb
2017-02-01T06:04:40.366Z WARN  [GeoIpResolverEngine] GeoIP database file does 
not exist: /etc/graylog/server/GeoLite2-City.mmdb
2017-02-01T06:04:40.503Z WARN  [GeoIpResolverEngine] GeoIP database file does 
not exist: /etc/graylog/server/GeoLite2-City.mmdb
2017-02-01T06:04:40.611Z WARN  [GeoIpResolverEngine] GeoIP database file does 
not exist: /etc/graylog/server/GeoLite2-City.mmdb
2017-02-01T06:04:40.716Z WARN  [GeoIpResolverEngine] GeoIP database file does 
not exist: /etc/graylog/server/GeoLite2-City.mmdb
2017-02-01T06:04:40.807Z WARN  [GeoIpResolverEngine] GeoIP database file does 
not exist: /etc/graylog/server/GeoLite2-City.mmdb
2017-02-01T06:04:40.906Z WARN  [GeoIpResolverEngine] GeoIP database file does 
not exist: /etc/graylog/server/GeoLite2-City.mmdb
2017-02-01T06:04:41.012Z WARN  [GeoIpResolverEngine] GeoIP database file does 
not exist: /etc/graylog/server/GeoLite2-City.mmdb
2017-02-01T06:04:41.107Z WARN  [GeoIpResolverEngine] GeoIP database file does 
not exist: /etc/graylog/server/GeoLite2-City.mmdb
2017-02-01T06:04:41.189Z WARN  [GeoIpResolverEngine] GeoIP database file does 
not exist: /etc/graylog/server/GeoLite2-City.mmdb
2017-02-01T06:04:41.266Z WARN  [GeoIpResolverEngine] GeoIP database file does 
not exist: /etc/graylog/server/GeoLite2-City.mmdb
2017-02-01T06:04:41.364Z WARN  [GeoIpResolverEngine] GeoIP database file does 
not exist: /etc/graylog/server/GeoLite2-City.mmdb
2017-02-01T06:04:41.451Z WARN  [GeoIpResolverEngine] GeoIP database file does 
not exist: /etc/graylog/server/GeoLite2-City.mmdb
2017-02-01T06:04:41.534Z WARN  [GeoIpResolverEngine] GeoIP database file does 
not exist: /etc/graylog/server/GeoLite2-City.mmdb
2017-02-01T06:04:41.617Z WARN  [GeoIpResolverEngine] GeoIP database file does 
not exist: /etc/graylog/server/GeoLite2-City.mmdb
2017-02-01T06:04:41.696Z WARN  [GeoIpResolverEngine] GeoIP database file does 
not exist: /etc/graylog/server/GeoLite2-City.mmdb
2017-02-01T06:04:41.803Z WARN  [GeoIpResolverEngine] GeoIP database file does 
not exist: /etc/graylog/server/GeoLite2-City.mmdb
2017-02-01T06:04:41.878Z WARN  [GeoIpResolverEngine] GeoIP database file does 
not exist: /etc/graylog/server/GeoLite2-City.mmdb
2017-02-01T06:04:41.974Z WARN  [GeoIpResolverEngine] GeoIP database file does 
not exist: /etc/graylog/server/GeoLite2-City.mmdb
2017-02-01T06:04:42.058Z WARN  [GeoIpResolverEngine] GeoIP database file does 
not exist: /etc/graylog/server/GeoLite2-City.mmdb
2017-02-01T06:04:42.144Z WARN  [GeoIpResolverEngine] GeoIP database file does 
not exist: /etc/graylog/server/GeoLite2-City.mmdb
2017-02-01T06:04:42.265Z WARN  [GeoIpResolverEngine] GeoIP database file does 
not exist: /etc/graylog/server/GeoLite2-City.mmdb
2017-02-01T06:04:42.352Z WARN  [GeoIpResolverEngine] GeoIP database file does 
not exist: /etc/graylog/server/GeoLite2-City.mmdb
2017-02-01T06:04:42.433Z WARN  [GeoIpResolverEngine] GeoIP database file does 
not exist: /etc/graylog/server/GeoLite2-City.mmdb
2017-02-01T06:04:42.510Z WARN  [GeoIpResolverEngine] GeoIP database file does 
not exist: /etc/graylog/server/GeoLite2-City.mmdb
2017-02-01T06:04:43.420Z INFO  [ServerBootstrap] Graylog server 
2.2.0-beta.6+ca80b06 starting up
2017-02-01T06:04:43.420Z INFO  [ServerBootstrap] JRE: Oracle Corporation 
1.8.0_111 on Linux 3.13.0-48-generic
2017-02-01T06:04:43.420Z INFO  [ServerBootstrap] Deployment: deb
2017-02-01T06:04:43.421Z INFO  [ServerBootstrap] OS: Ubuntu 14.04.3 LTS (trusty)
2017-02-01T06:04:43.421Z INFO  [ServerBootstrap] Arch: amd64
2017-02-01T06:04:43.425Z WARN  [DeadEventLoggingListener] Received unhandled 
event of type <org.graylog2.plugin.lifecycles.Lifecycle> from event bus 
<AsyncEventBus{graylog-eventbus}>
2017-02-01T06:04:43.442Z INFO  [PeriodicalsService] Starting 26 periodicals ...
2017-02-01T06:04:43.442Z INFO  [Periodicals] Starting 
[org.graylog2.periodical.ThroughputCalculator] periodical in [0s], polling 
every [1s].
2017-02-01T06:04:43.492Z INFO  [PeriodicalsService] Not starting 
[org.graylog2.periodical.AlertScannerThread] periodical. Only started on 
Graylog master nodes.
2017-02-01T06:04:43.493Z INFO  [Periodicals] Starting 
[org.graylog2.periodical.BatchedElasticSearchOutputFlushThread] periodical in 
[0s], polling every [1s].
2017-02-01T06:04:43.493Z INFO  [PeriodicalsService] Not starting 
[org.graylog2.periodical.ClusterHealthCheckThread] periodical. Only started on 
Graylog master nodes.
2017-02-01T06:04:43.493Z INFO  [PeriodicalsService] Not starting 
[org.graylog2.periodical.ContentPackLoaderPeriodical] periodical. Only started 
on Graylog master nodes.
2017-02-01T06:04:43.493Z INFO  [Periodicals] Starting 
[org.graylog2.periodical.GarbageCollectionWarningThread] periodical, running 
forever.
2017-02-01T06:04:43.493Z INFO  [PeriodicalsService] Not starting 
[org.graylog2.periodical.IndexerClusterCheckerThread] periodical. Only started 
on Graylog master nodes.
2017-02-01T06:04:43.493Z INFO  [PeriodicalsService] Not starting 
[org.graylog2.periodical.IndexRetentionThread] periodical. Only started on 
Graylog master nodes.
2017-02-01T06:04:43.494Z INFO  [PeriodicalsService] Not starting 
[org.graylog2.periodical.IndexRotationThread] periodical. Only started on 
Graylog master nodes.
2017-02-01T06:04:43.494Z INFO  [Periodicals] Starting 
[org.graylog2.periodical.NodePingThread] periodical in [0s], polling every [1s].
2017-02-01T06:04:43.494Z INFO  [PeriodicalsService] Not starting 
[org.graylog2.periodical.VersionCheckThread] periodical. Only started on 
Graylog master nodes.
2017-02-01T06:04:43.494Z INFO  [Periodicals] Starting 
[org.graylog2.periodical.ThrottleStateUpdaterThread] periodical in [1s], 
polling every [1s].
2017-02-01T06:04:43.494Z INFO  [Periodicals] Starting 
[org.graylog2.events.ClusterEventPeriodical] periodical in [0s], polling every 
[1s].
2017-02-01T06:04:43.495Z INFO  [PeriodicalsService] Not starting 
[org.graylog2.events.ClusterEventCleanupPeriodical] periodical. Only started on 
Graylog master nodes.
2017-02-01T06:04:43.495Z INFO  [PeriodicalsService] Not starting 
[org.graylog2.periodical.ClusterIdGeneratorPeriodical] periodical. Only started 
on Graylog master nodes.
2017-02-01T06:04:43.495Z INFO  [PeriodicalsService] Not starting 
[org.graylog2.periodical.IndexRangesMigrationPeriodical] periodical. Only 
started on Graylog master nodes.
2017-02-01T06:04:43.495Z INFO  [PeriodicalsService] Not starting 
[org.graylog2.periodical.IndexRangesCleanupPeriodical] periodical. Only started 
on Graylog master nodes.
2017-02-01T06:04:43.495Z INFO  [PeriodicalsService] Not starting 
[org.graylog2.periodical.UserPermissionMigrationPeriodical] periodical. Only 
started on Graylog master nodes.
2017-02-01T06:04:43.495Z INFO  [PeriodicalsService] Not starting 
[org.graylog2.periodical.AlarmCallbacksMigrationPeriodical] periodical. Only 
started on Graylog master nodes.
2017-02-01T06:04:43.495Z INFO  [PeriodicalsService] Not starting 
[org.graylog2.periodical.ConfigurationManagementPeriodical] periodical. Only 
started on Graylog master nodes.
2017-02-01T06:04:43.495Z INFO  [PeriodicalsService] Not starting 
[org.graylog2.periodical.LdapGroupMappingMigration] periodical. Only started on 
Graylog master nodes.
2017-02-01T06:04:43.509Z INFO  [node] 
[graylog-f7636182-5b01-4fb6-965d-b904415109aa] starting ...
2017-02-01T06:04:43.511Z INFO  [Periodicals] Starting 
[org.graylog2.periodical.IndexFailuresPeriodical] periodical, running forever.
2017-02-01T06:04:43.522Z INFO  [Periodicals] Starting 
[org.graylog.plugins.usagestatistics.UsageStatsNodePeriodical] periodical in 
[300s], polling every [21600s].
2017-02-01T06:04:43.523Z INFO  [PeriodicalsService] Not starting 
[org.graylog.plugins.usagestatistics.UsageStatsClusterPeriodical] periodical. 
Not configured to run on this node.
2017-02-01T06:04:43.524Z INFO  [PeriodicalsService] Not starting 
[org.graylog.plugins.pipelineprocessor.periodical.LegacyDefaultStreamMigration] 
periodical. Only started on Graylog master nodes.
2017-02-01T06:04:43.525Z INFO  [PeriodicalsService] Not starting 
[org.graylog.plugins.collector.periodical.PurgeExpiredCollectorsThread] 
periodical. Only started on Graylog master nodes.
2017-02-01T06:04:43.523Z INFO  [connection] Opened connection 
[connectionId{localValue:6, serverValue:43118}] to IP3:27017
2017-02-01T06:04:43.530Z INFO  [connection] Opened connection 
[connectionId{localValue:5, serverValue:43117}] to IP3:27017
2017-02-01T06:04:43.651Z INFO  [transport] 
[graylog-f7636182-5b01-4fb6-965d-b904415109aa] publish_address {IP1:9350}, 
bound_addresses {[::]:9350}
2017-02-01T06:04:43.658Z INFO  [discovery] 
[graylog-f7636182-5b01-4fb6-965d-b904415109aa] 
elasticsearch-graylog/6QDVOQvNRfWYvZ6iiFMLkg
2017-02-01T06:04:43.877Z INFO  [JerseyService] Enabling CORS for HTTP endpoint
2017-02-01T06:04:46.664Z WARN  [discovery] 
[graylog-f7636182-5b01-4fb6-965d-b904415109aa] waited for 3s and no initial 
state was set by the discovery
2017-02-01T06:04:46.665Z INFO  [node] 
[graylog-f7636182-5b01-4fb6-965d-b904415109aa] started
2017-02-01T06:04:46.737Z INFO  [service] 
[graylog-f7636182-5b01-4fb6-965d-b904415109aa] detected_master ....reason: 
zen-disco-receive(from master ...
2017-02-01T06:04:53.355Z INFO  [NetworkListener] Started listener bound to 
[0.0.0.0:12900]
2017-02-01T06:04:53.357Z INFO  [HttpServer] [HttpServer] Started.
2017-02-01T06:04:53.357Z INFO  [JerseyService] Started REST API at 
<http://0.0.0.0:12900/>
2017-02-01T06:04:53.380Z INFO  [JerseyService] Enabling CORS for HTTP endpoint
2017-02-01T06:04:56.344Z INFO  [NetworkListener] Started listener bound to 
[0.0.0.0:9000]
2017-02-01T06:04:56.344Z INFO  [HttpServer] [HttpServer-1] Started.
2017-02-01T06:04:56.344Z INFO  [JerseyService] Started Web Interface at 
<https://0.0.0.0:9000/>
2017-02-01T06:04:56.345Z INFO  [ServiceManagerListener] Services are healthy
2017-02-01T06:04:56.345Z INFO  [ServerBootstrap] Services started, startup 
times in ms: {InputSetupService [RUNNING]=3, OutputSetupService [RUNNING]=77, 
BufferSynchronizerService [RUNNING]=78, KafkaJournal [RUNNING]=80, 
PeriodicalsService [RUNNING]=85, JournalReader [RUNNING]=85, 
ConfigurationEtagService [RUNNING]=87, StreamCacheService [RUNNING]=111, 
IndexerSetupService [RUNNING]=3334, JerseyService [RUNNING]=12903}
2017-02-01T06:04:56.346Z INFO  [InputSetupService] Triggering launching 
persisted inputs, node transitioned from Uninitialized?[LB:DEAD] to 
Running?[LB:ALIVE]
2017-02-01T06:04:56.352Z INFO  [ServerBootstrap] Graylog server up and running.
2017-02-01T06:04:56.357Z INFO  [InputStateListener] Input [Raw/Plaintext 
Kafka/588759e1cd48734b1797255c] is now STARTING
2017-02-01T06:04:56.359Z INFO  [InputStateListener] Input [Raw/Plaintext 
Kafka/588f5f75cd48732a8e71d7f9] is now STARTING
2017-02-01T06:04:56.360Z INFO  [InputStateListener] Input [Raw/Plaintext 
Kafka/588e0185cd487370d64bf67d] is now STARTING
2017-02-01T06:04:56.371Z INFO  [VerifiableProperties] Verifying properties
2017-02-01T06:04:56.371Z INFO  [VerifiableProperties] Verifying properties
2017-02-01T06:04:56.372Z INFO  [VerifiableProperties] Verifying properties
2017-02-01T06:04:56.375Z INFO  [VerifiableProperties] Property 
auto.commit.interval.ms is overridden to 1000
2017-02-01T06:04:56.375Z INFO  [VerifiableProperties] Property 
auto.commit.interval.ms is overridden to 1000
2017-02-01T06:04:56.375Z INFO  [VerifiableProperties] Property 
auto.commit.interval.ms is overridden to 1000
2017-02-01T06:04:56.375Z INFO  [VerifiableProperties] Property client.id is 
overridden to gl2-f7636182-5b01-4fb6-965d-b904415109aa-588f5f75cd48732a8e71d7f9
2017-02-01T06:04:56.375Z INFO  [VerifiableProperties] Property client.id is 
overridden to gl2-f7636182-5b01-4fb6-965d-b904415109aa-588e0185cd487370d64bf67d
2017-02-01T06:04:56.375Z INFO  [VerifiableProperties] Property client.id is 
overridden to gl2-f7636182-5b01-4fb6-965d-b904415109aa-588759e1cd48734b1797255c
2017-02-01T06:04:56.375Z INFO  [VerifiableProperties] Property 
consumer.timeout.ms is overridden to 1000
2017-02-01T06:04:56.375Z INFO  [VerifiableProperties] Property 
consumer.timeout.ms is overridden to 1000
2017-02-01T06:04:56.375Z INFO  [VerifiableProperties] Property 
consumer.timeout.ms is overridden to 1000
2017-02-01T06:04:56.375Z INFO  [VerifiableProperties] Property fetch.min.bytes 
is overridden to 5
2017-02-01T06:04:56.375Z INFO  [VerifiableProperties] Property fetch.min.bytes 
is overridden to 5
2017-02-01T06:04:56.376Z INFO  [VerifiableProperties] Property fetch.min.bytes 
is overridden to 5
2017-02-01T06:04:56.376Z INFO  [VerifiableProperties] Property 
fetch.wait.max.ms is overridden to 100
2017-02-01T06:04:56.376Z INFO  [VerifiableProperties] Property 
fetch.wait.max.ms is overridden to 100
2017-02-01T06:04:56.376Z INFO  [VerifiableProperties] Property 
fetch.wait.max.ms is overridden to 100
2017-02-01T06:04:56.376Z INFO  [VerifiableProperties] Property group.id is 
overridden to graylog2
2017-02-01T06:04:56.376Z INFO  [VerifiableProperties] Property group.id is 
overridden to graylog2
2017-02-01T06:04:56.376Z INFO  [VerifiableProperties] Property group.id is 
overridden to graylog2
2017-02-01T06:04:56.376Z INFO  [VerifiableProperties] Property 
zookeeper.connect is overridden to ...
2017-02-01T06:04:56.376Z INFO  [VerifiableProperties] Property 
zookeeper.connect is overridden to ...
2017-02-01T06:04:56.376Z INFO  [VerifiableProperties] Property 
zookeeper.connect is overridden to ...
2017-02-01T06:04:56.394Z INFO  [ZookeeperConsumerConnector] 
[graylog2_...-1485929096393-25d999de], Connecting to zookeeper instance at ...
2017-02-01T06:04:56.394Z INFO  [ZookeeperConsumerConnector] 
[graylog2_...-1485929096393-dfeecc8f], Connecting to zookeeper instance at ...
2017-02-01T06:04:56.394Z INFO  [ZookeeperConsumerConnector] 
[graylog2_...-1485929096393-7617aa40], Connecting to zookeeper instance at ...
2017-02-01T06:04:56.403Z INFO  [ZkEventThread] Starting ZkClient event thread.
2017-02-01T06:04:56.403Z INFO  [ZkEventThread] Starting ZkClient event thread.
2017-02-01T06:04:56.404Z INFO  [ZkEventThread] Starting ZkClient event thread.
2017-02-01T06:04:56.410Z INFO  [ZooKeeper] Client 
environment:zookeeper.version=3.4.9-1757313, built on 08/23/2016 06:50 GMT
2017-02-01T06:04:56.410Z INFO  [ZooKeeper] Client environment:host.name=...
2017-02-01T06:04:56.410Z INFO  [ZooKeeper] Client 
environment:java.version=1.8.0_111
2017-02-01T06:04:56.410Z INFO  [ZooKeeper] Client 
environment:java.vendor=Oracle Corporation
2017-02-01T06:04:56.411Z INFO  [ZooKeeper] Client 
environment:java.home=/usr/lib/jvm/java-8-oracle/jre
2017-02-01T06:04:56.411Z INFO  [ZooKeeper] Client 
environment:java.class.path=/usr/share/graylog-server/graylog.jar
2017-02-01T06:04:56.411Z INFO  [ZooKeeper] Client 
environment:java.library.path=/usr/share/graylog-server/lib/sigar
2017-02-01T06:04:56.411Z INFO  [ZooKeeper] Client 
environment:java.io.tmpdir=/tmp
2017-02-01T06:04:56.411Z INFO  [ZooKeeper] Client environment:java.compiler=<NA>
2017-02-01T06:04:56.411Z INFO  [ZooKeeper] Client environment:os.name=Linux
2017-02-01T06:04:56.411Z INFO  [ZooKeeper] Client environment:os.arch=amd64
2017-02-01T06:04:56.411Z INFO  [ZooKeeper] Client 
environment:os.version=3.13.0-48-generic
2017-02-01T06:04:56.411Z INFO  [ZooKeeper] Client environment:user.name=graylog
2017-02-01T06:04:56.411Z INFO  [ZooKeeper] Client 
environment:user.home=/var/lib/graylog-server
2017-02-01T06:04:56.411Z INFO  [ZooKeeper] Client environment:user.dir=/
2017-02-01T06:04:56.412Z INFO  [ZooKeeper] Initiating client connection, 
connectString=... sessionTimeout=6000 
watcher=org.I0Itec.zkclient.ZkClient@7db6d0ea
2017-02-01T06:04:56.412Z INFO  [ZooKeeper] Initiating client connection, 
connectString=... sessionTimeout=6000 
watcher=org.I0Itec.zkclient.ZkClient@5b1280f5
2017-02-01T06:04:56.412Z INFO  [ZooKeeper] Initiating client connection, 
connectString=... sessionTimeout=6000 
watcher=org.I0Itec.zkclient.ZkClient@16a80671
2017-02-01T06:04:56.424Z INFO  [ZkClient] Waiting for keeper state SyncConnected
2017-02-01T06:04:56.425Z INFO  [ZkClient] Waiting for keeper state SyncConnected
2017-02-01T06:04:56.429Z INFO  [ClientCnxn] Opening socket connection to server 
...
2017-02-01T06:04:56.429Z INFO  [ClientCnxn] Opening socket connection to server 
...
2017-02-01T06:04:56.430Z INFO  [ClientCnxn] Socket connection established to 
..., initiating session
2017-02-01T06:04:56.430Z INFO  [ClientCnxn] Socket connection established to 
..., initiating session
2017-02-01T06:04:56.435Z INFO  [ClientCnxn] Session establishment complete on 
server ..., sessionid = 0x759f42ff12406f7, negotiated timeout = 6000
2017-02-01T06:04:56.435Z INFO  [ClientCnxn] Session establishment complete on 
server ..., sessionid = 0x659a74cf4230f64, negotiated timeout = 6000
2017-02-01T06:04:56.437Z INFO  [ZkClient] zookeeper state changed 
(SyncConnected)
2017-02-01T06:04:56.436Z INFO  [ZkClient] zookeeper state changed 
(SyncConnected)
2017-02-01T06:04:56.448Z INFO  [ZookeeperConsumerConnector] 
[graylog2_...-1485929096393-7617aa40], starting auto committer every 1000 ms
2017-02-01T06:04:56.448Z INFO  [ZookeeperConsumerConnector] 
[graylog2_...-1485929096393-dfeecc8f], starting auto committer every 1000 ms
2017-02-01T06:04:56.452Z INFO  [ZkClient] Waiting for keeper state SyncConnected
2017-02-01T06:04:56.458Z INFO  [ClientCnxn] Opening socket connection to server 
...
2017-02-01T06:04:56.459Z INFO  [ClientCnxn] Socket connection established to 
..., initiating session
2017-02-01T06:04:56.462Z INFO  [ClientCnxn] Session establishment complete on 
server ..., sessionid = 0x159f6bbbd725ac9, negotiated timeout = 6000
2017-02-01T06:04:56.464Z INFO  [ZkClient] zookeeper state changed 
(SyncConnected)
2017-02-01T06:04:56.465Z INFO  [ZookeeperConsumerConnector] 
[graylog2_...-1485929096393-25d999de], starting auto committer every 1000 ms

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