Amit,

I know of a university professor and a university lecturer who use Go for 
computational biology. They solve some interesting computer science 
problems.

You say your code is efficient: 
https://pkg.go.dev/github.com/fluhus/biostuff

I looked at your code and picked something simple: 

    package align 

    func (SubstitutionMatrix) GoString.

I made some simple revisions to improve efficiency and ran a Go benchmark.

    BenchmarkAL-4   6807   160245 ns/op   35941 B/op   1344 allocs/op
    BenchmarkPG-4   7929   137172 ns/op   17354 B/op   1101 allocs/op

Your code (AL) appears to be less efficient than my revised version (PG).

peter

On Monday, May 9, 2022 at 8:16:56 AM UTC-4 amitl...@gmail.com wrote:

> Sharing a package suite that I've written for my computational biology 
> research and may be useful for others.
>
> Hope it helps!
>
> https://pkg.go.dev/github.com/fluhus/biostuff
>

-- 
You received this message because you are subscribed to the Google Groups 
"golang-nuts" group.
To unsubscribe from this group and stop receiving emails from it, send an email 
to golang-nuts+unsubscr...@googlegroups.com.
To view this discussion on the web visit 
https://groups.google.com/d/msgid/golang-nuts/513a63de-6ed7-4f15-888a-52d656c2e837n%40googlegroups.com.

Reply via email to