Im having problems migrating from version 1.2.4 to 2.0.9

I have transfered all my keys from the old envirmoment to the new
enviroment. Now our applications can't use the api in the software to
decrypt a file anymore. The passphrase does not work any more. If I want to
remove the passprase I get this error:

You need a passphrase to unlock the secret key for
user: ...........
2048-bit RSA key, ID 182D0209, created 2011-03-30

can't connect to `/home/user/.gnupg/S.gpg-agent': No such file or directory
gpg-agent[22946]: command get_passphrase failed: Operation cancelled
gpg: cancelled by user
Can't edit this key: General error

How can I fix this?
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