Sounds like a bug. I shouldn’t think the method used to clear them should 
change the fact that they show up checked or not.

Regards,
Adrien

> On Jun 14, 2019, at 8:45 AM, Stephen C. Camidge <scami...@fastmail.fm> wrote:
> 
> The transactions retain the 'c' but are not always checked off when I resume 
> the reconciliation vis the reconcile window.
> 
> 
> 
> On Fri, Jun 14, 2019, at 9:41 AM, Adrien Monteleone wrote:
>> Not sure, but ‘partially reconciled’ is simply ‘cleared’ as you can 
>> change the individual transactions in the register to ‘c’ without using 
>> the reconciliation procedure. When you start that process, all 
>> transactions marked ‘c’ will be checked off for you.
>> 
>> That status *should* be saved however, I would think, even if they 
>> aren’t checked off manually. (that is, via the reconcile window)
>> 
>> Regards,
>> Adrien
>> 
>>> On Jun 14, 2019, at 7:50 AM, Stephen C. Camidge <scami...@fastmail.fm> 
>>> wrote:
>>> 
>>> Using version 3.5 on Mac OS, I find the following:
>>> 
>>> Reconcile a bank or credit card, but at the end, hit postpone. I do this so 
>>> that I can keep track of what is currently reconciled. I do the full 
>>> reconcile at monthend.
>>> 
>>> Save the file.
>>> 
>>> Close the file.
>>> 
>>> Re-open the file.
>>> 
>>> Reconcile the bank or credit card. The previously partially reconciled 
>>> items are no longer partially reconciled. 
>>> 
>>> This happens most of the time - sometimes it stays partially reconciled. To 
>>> me, it should stay partially reconciled.
>>> 
>>> Is this a known feature?
>> 


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