On 11/2/13 6:32 AM, Hossein Lanjanian wrote:
Thank Justin for your help
What forcefield is most suitable to study this case?
The one that your careful study of the literature tells you is the most
reliable. It's up to you to justify your choice, not what someone on the
Internet tells you :)
-Justin
On Oct 31, 2013 1:56 PM, "Hossein Lanjanian" <hossein.lanjan...@gmail.com>
wrote:
Hi
I'm going to study the molecular dynamics of an RNA(which has stem-loop
structure) by comparison the native RNA structure and it's mutant to find
the conformation changes of 3D structure. This RNA comprises 70
nucleotides. Do you think that it would be possible in Gromacs.
--
==================================================
Justin A. Lemkul, Ph.D.
Postdoctoral Fellow
Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 601
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201
jalem...@outerbanks.umaryland.edu | (410) 706-7441
==================================================
--
gmx-users mailing list gmx-users@gromacs.org
http://lists.gromacs.org/mailman/listinfo/gmx-users
* Please search the archive at
http://www.gromacs.org/Support/Mailing_Lists/Search before posting!
* Please don't post (un)subscribe requests to the list. Use the
www interface or send it to gmx-users-requ...@gromacs.org.
* Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
