Dear Justin About following warning in grompp using
WARNING 1 [file em.mdp]: The sum of the two largest charge group radii (6.940482) is larger than rlist (1.200000) You said "You probably have molecules split across PBC in the input coordinate file. here's nothing wrong in that case" I mention that I used input coordinate file from folloowing web site" http://cmb.bio.uni-goettingen.de/cholmembranes.html. Structures in this website were equilibrated 195 ns. Nonetheless, has my input coordinate file problem? -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
