On Sat, Sep 7, 2013 at 4:55 PM, Qin Qiao <qiaoqi...@gmail.com> wrote:
> Dear all, > > I'm trying to install gromacs4.6.3 with mvapich2-1.9a on a local cluster > and got the following error in step 'make': > > "/usr/bin/ld: > /usr/local/mvapich2-1.9a-gcc/lib/libmpich.a(mvapich_malloc.o): relocation > R_X86_64_32 against `.bss' can not be used when making a shared object; > recompile with -fPIC > /usr/local/mvapich2-1.9a-gcc/lib/libmpich.a: could not read symbols: Bad > value > " > > I was using command > "cmake .. -DCMAKE_INSTALL_PREFIX=/.../gromacs-4.6.3/ > -DGMX_BUILD_OWN_FFTW=ON -BUILD_SHARED_LIBS='no' > Also with flag -DGMX_MPI=ON, sorry > " > and I thought the mvapich is compiled with --enable-shared... > > Could you give me some advice if possible? Thanks in advance. > > Best > Qin > -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
