On 8/5/13 8:06 AM, Magnus Andersson wrote:


I've had this happen before when trying to analyze too many data points.  Try 
reducing the size of the input data using -b to see if that helps.

-Justin

Thanks for the suggestion, Justin. However, either it hangs or I get:

Fatal error:
Tryig to estimtate autocorrelation time from only 6 points. Provide more pull 
data!

when providing too few frames.

Any suggestions on how to proceed? I really need those error bars... :-)


What version of Gromacs are you using? How many data points do you have in the full set?

-Justin

--
==================================================

Justin A. Lemkul, Ph.D.
Postdoctoral Fellow

Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 601
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201

jalem...@outerbanks.umaryland.edu | (410) 706-7441

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