On 7/24/13 2:55 AM, Sathish Kumar wrote:
I am doing simulation of metal clusters with membranes by position restrain
(with f=1000) the membrane. In this simulation the structure of metal
cluster is collapsed after entering into membrane. I want to preserves its
structure with out doing position restrain the metal cluster because it has
to move. Can you please suggest me how can I solve this problem.


Geometry is a function of the topology. Setting correct parameters for whatever the desired or expected geometry is should alleviate the issue.

-Justin

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==================================================

Justin A. Lemkul, Ph.D.
Postdoctoral Fellow

Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 601
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201

jalem...@outerbanks.umaryland.edu | (410) 706-7441

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