Dear users
To generate a topology file for an arbitrary molecule, I used g_x2top program. I added following lines to atomname2type.n2t: .. .. C opls_145B 0.080627 12.0110 3 C 0.1395 C 0.1395 C 0.149 C opls_145B 0.091698 12.0110 3 C 0.149 C 0.1395 C 0.1395 .. But, generated topology file is as the following: . [ atoms ] ; nr type resnr residue atom cgnr charge mass typeB chargeB massB .. .. 17 opls_145 1 TPT C15 1 0.037549 12.011 ; qtot -0.4087 18 opls_145 1 TPT C12 1 0.037549 12.011 ; qtot -0.3712 .. I don’t know, why g_x2top program replaces opls_145B (in .n2t) with opls_145 atom type to generate topology file? Thanks in advance, Afsaneh -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists