Bellow are commands and error message: 1- trjconv_d -f traj.xtc -n maxclust.ndx -o traj_out.xtc
2- g_sas_d -f traj_out.xtc -n maxclust.ndx -o surface.xvg -nopbc glibc detected *** g_sas_d: malloc(): memory corruption: 0x00000000016dfcd0 Rasoul On Thu, Jul 18, 2013 at 1:01 PM, Justin Lemkul <jalem...@vt.edu> wrote: > > > On 7/18/13 6:52 AM, Rasoul Nasiri wrote: > >> Hello all, >> >> I'm trying to know how the surface area of a nano-drop changes during the >> evaporation in the vacuum. >> >> When I filter the trajectory of non-evaporated molecules by trjconv and >> use >> g_sas for calculation of their surface, it usually crash (I'm using >> version >> of 4.5.5). >> >> > What's the error message? What's your command? > > > Is there still this issue in the 4.6.*? How it can be resolved? >> >> > Have you tried version 4.6? That's the quickest way to know. If there > are still problems, you'll need to provide more information. > > -Justin > > -- > ==============================**==================== > > Justin A. Lemkul, Ph.D. > Postdoctoral Fellow > > Department of Pharmaceutical Sciences > School of Pharmacy > Health Sciences Facility II, Room 601 > University of Maryland, Baltimore > 20 Penn St. > Baltimore, MD 21201 > > jalemkul@outerbanks.umaryland.**edu <jalem...@outerbanks.umaryland.edu> | > (410) 706-7441 > > ==============================**==================== > -- > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/**mailman/listinfo/gmx-users<http://lists.gromacs.org/mailman/listinfo/gmx-users> > * Please search the archive at http://www.gromacs.org/** > Support/Mailing_Lists/Search<http://www.gromacs.org/Support/Mailing_Lists/Search>before > posting! > * Please don't post (un)subscribe requests to the list. Use the www > interface or send it to gmx-users-requ...@gromacs.org. > * Can't post? Read > http://www.gromacs.org/**Support/Mailing_Lists<http://www.gromacs.org/Support/Mailing_Lists> > -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
