The error happens on the last line it reached. Take a look at it :-) Mark
On Sun, Jul 7, 2013 at 9:52 AM, Albert <mailmd2...@gmail.com> wrote: > On 07/06/2013 10:17 PM, Mark Abraham wrote: >> >> That's a completely different output. I think both your executables >> are broken, somehow. Clean the build and install trees and try again >> :-) >> >> Mark > > > > Hello Mark: > > thanks a lot for kind messages. The previous problem was solved by Justin's > sugguestions. Here is the errors from debug: > > Ignoring obsolete mdp entry 'title' > Ignoring obsolete mdp entry 'cpp' > > Back Off! I just backed up mdout.mdp to ./#mdout.mdp.3# > > NOTE 1 [file topol.top, line 1]: > Debugging > NOTE 2 [file topol.top, line 2]: > Debugging > NOTE 3 [file topol.top, line 3]: > Debugging > ...... > NOTE 18 [file topol.top, line 18]: > DebugginG > NOTE 19 [file forcefield.itp, line 1]: > Debugging > NOTE 20 [file forcefield.itp, line 2]: > Debugging > .... > NOTE 3474 [file ffbonded.itp, line 820]: > Debugging > NOTE 3475 [file ffbonded.itp, line 821]: > Debugging > ------------------------------------------------------- > Program grompp, VERSION 4.6.3 > Source code file: > kernel/topdirs.c, line: 106 > > > Fatal error: > Invalid angle type 0 > For more information and tips for troubleshooting, please check the GROMACS > website at http://www.gromacs.org/Documentation/Errors > ------------------------------------------------------- > > I still don't know where is the problem. > > thank yo uvery much > > Albert > > -- > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > * Please don't post (un)subscribe requests to the list. Use the www > interface or send it to gmx-users-requ...@gromacs.org. > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
