On 6/5/13 2:13 PM, Steven Neumann wrote:
Dear Gmx Users,

I wish to obtain the 2D scatter plot in which I will have my protein
Ca-Ca-Ca tetta angle and the psi angle N(i)-CA(i)-C(k)-N(i+1) of the
central residue?

Would you please help?


Use g_angle to extract whatever quantities you want, then use your favorite scripting language (awk works nicely) to extract the columns and plot them against one another.

-Justin

--
========================================

Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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