Hi Valentina
The first lines of your rtp files should be something like this
where you specify the type (function) of the interaction
[ bondedtypes ]
; bonds angles dihedrals impropers all_dihedrals nrexcl HH14 RemoveDih
1 5 9 2 1 3 1 0
John
--
View this message in context:
http://gromacs.5086.x6.nabble.com/pdb2gmx-tp5008799p5008816.html
Sent from the GROMACS Users Forum mailing list archive at Nabble.com.
--
gmx-users mailing list [email protected]
http://lists.gromacs.org/mailman/listinfo/gmx-users
* Please search the archive at
http://www.gromacs.org/Support/Mailing_Lists/Search before posting!
* Please don't post (un)subscribe requests to the list. Use the
www interface or send it to [email protected].
* Can't post? Read http://www.gromacs.org/Support/Mailing_Lists