Hi, To get useful help with this issue you need to provide a more informative description of what when wrong, i.e. what gromacs tool was invoked and what input was used.
Erik On 20 May 2013, at 10:59, Pruthvi Bejugam <pruthvi.n...@gmail.com> wrote: > Hi all, > > I want to perform a RNA (Just RNA no protein or DNA > included) MD Simulation. Can anybody suggest me what are the general > parameters should be used for the RNA MD Simulations. > I know that AMBER and CHARMM force field work well for DNA and RNA. i have > tried the RNA MD simulation using AMBER force field and it got failed and > the error was "FATAL error found no suitable atoms in the parameters." so, > any one please help me out with this problem. > > > Thanks In advance, > > > -- > Pruthvi Raj. B, > JRF, Lab no. 9 (New Building), > Computational and Systems Biology Lab, > National Centre for Cell Science, > UoP Campus, Ganeshkhind, > Pune, Maharashtra, 411007 > -- > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > * Please don't post (un)subscribe requests to the list. Use the > www interface or send it to gmx-users-requ...@gromacs.org. > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
