On 5/8/13 3:03 PM, zugunder wrote:
Sorry guys, just figured it out:
correct syntax is g_do_dssp :-)
Maybe, it would worth correcting the online manual for GROMACS (which is for
4.6.1 version now)? do_dssp and editconf are mentioned there without "g_"
prefix, unlike many other commands...
Prefixes like these are not standard in Gromacs nomenclature and are a result of
the way that pre-packaged distributions were created for different operating
systems. I believe the Fedora package is the same way.
-Justin
--
========================================
Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
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