I think you can process the trajectories without generating TPR. Dr. Vitaly Chaban
On Tue, May 7, 2013 at 12:12 PM, Venkat Reddy <venkat...@gmail.com> wrote: > Dear gromacs users, > > I am analyzing trajectories of an ionic liquid system generated using AMBER > MD package. The force field parameters are typical of this IL system and > not from the existing libraries. Hence, it is difficult for me to generate > a tpr file. I understand that running the g_spatial command needs > pre-processing of the coordinates (Steps 1 and 2 in g_spatial help) but I > need tpr file for that. So there is no way of doing g_spatial without a > tpr file is it? Then how do I generate tpr file for my system? > > Thanks for all the help > -- > With Best Wishes > Venkat Reddy Chirasani > PhD student > Laboratory of Computational Biophysics > Department of Biotechnology > IIT Madras > Chennai > INDIA-600036 > -- > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > * Please don't post (un)subscribe requests to the list. Use the > www interface or send it to gmx-users-requ...@gromacs.org. > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
