I always do. There's nothing particular about umbrella sampling in this respect.
On 4 Apr 2013, at 17:33, raghav singh <raghavbioi...@gmail.com> wrote: > Hello Fellow Users, > > I have a question regarding US simulation. > I am interested to know that can I treat hydrogens as virtual sites in US > simulations?? > I have very large protein complexes and to use higher time stepping during > simulations...I am thinking to use -vsite option. > > what do you guys suggest?? > > Thank you > Raghav > -- > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > * Please don't post (un)subscribe requests to the list. Use the > www interface or send it to gmx-users-requ...@gromacs.org. > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
