On Mon, Apr 1, 2013 at 11:50 AM, vidhya sankar <scvsankar_...@yahoo.com>wrote:
> Dear Justin Thank you for your Previous reply, > > I would Like to Construct a system of Single walled Carbon Nano tubes > (SWCNT) > Which should be Wrapped by Assembly of Cyclic Peptide . it Means CNT > should be inserted Along the Cavity of Cyclic peptide > > I have separate .gro file for Both CNT and Assembly of Cyclic Peptide > > How to Merge These two .gro files As in the Aforesaid Manner. I hope > your suggestion would He Helpful to me > > Position the different elements of the system wherever you like with editconf -center, which should be easy in this case since the peptide and CNT have coincident centers, at least within the plane perpendicular to the long axis of the CNT. Then just merge the .gro files with cat, clean up extraneous headers and box vectors in the middle of the file, adjust the number of atoms on the second line, and you're good to go. -Justin -- ======================================== Justin A. Lemkul, Ph.D. Research Scientist Department of Biochemistry Virginia Tech Blacksburg, VA jalemkul[at]vt.edu | (540) 231-9080http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin ======================================== -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
