The attachment was not sent. This is the topology:
[ defaults ] ; nbfunc comb-rule gen-pairs fudgeLJ fudgeQQ 2 1 no 1.0 1.0 [ atomtypes ] ;type at.num mass charge ptype A B C Oc 8 15.99940 -2.000 A 0.000000000 0.000000000 0.000000000 NA 11 22.99000 1.000 A 0.000000000 0.000000000 0.000000000 AL 13 26.98000 3.000 A 0.000000000 0.000000000 0.000000000 [ nonbond_params ] ; i j func A (kJ/mol) B (nm-1) C (kJ/mol*nm6) Oc Oc 2 921238.1335 45.62043796 0.002798075 NA Oc 2 57495.71256 26.69172130 0.000000000 AL Oc 2 73946.9875 29.42362069 0.000000000 NA NA 2 0.000000000 0.000000000 0.000000000 NA AL 2 0.000000000 0.000000000 0.000000000 [ moleculetype ] ; NAme nrexcl AL 0 [ atoms ] ; nr type resnr residu atom cgnr charge 1 AL 1 UNK AL 1 [ moleculetype ] ; Name nrexcl Na 0 [ atoms ] ; nr type resnr residue atom cgnr charge mass typeB chargeB massB 1 NA 1 UNK NA 2 [ moleculetype ] ; Name nrexcl Oc 0 [ atoms ] ; nr type resnr residue atom cgnr charge mass typeB chargeB massB 1 Oc 1 UNK Oc 3 [ system ] 6x7x1 [ molecules ] ; Compound #mols AL 1386 NA 126 Oc 2142 -- View this message in context: http://gromacs.5086.n6.nabble.com/Simualtion-blows-up-with-Verlet-cutoff-scheme-tp5006304p5006305.html Sent from the GROMACS Users Forum mailing list archive at Nabble.com. -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists