I am very new to Linux and probably this is a very general thing i may be seeking help for.
I am facing problems in compiling GROMACS after installing the prerequisites (fftw-3.3.3)
I get the following error towards the end of "make"
# make
recompile with -fPIC
/usr/local/lib/libfftw3f.a: could not read symbols: Bad value
collect2: ld returned 1 exit status
make[3]: *** [libmd.la] Error 1
make[3]: Leaving directory `/root/Desktop/gromacs-4.5.6/src/mdlib'
make[2]: *** [all-recursive] Error 1
make[2]: Leaving directory `/root/Desktop/gromacs-4.5.6/src'
make[1]: *** [all] Error 2
make[1]: Leaving directory `/root/Desktop/gromacs-4.5.6/src'
make: *** [all-recursive] Error 1
I have gone through all instructions given on the the GROMACS installation page (http://www.gromacs.org/Documentation/Installation_Instructions_4.5#Compilation)
incase this was to happen but nothing given there fixes it.
There was no problem in FFTW-3.3.3 compiling and installation.
Appreciate any help.
Best Regards,
Ekta Jain
Research Analyst
Biotechnology and Bio-resources Division
The Energy and Resources Institute, India Habitat Centre
Lodhi Road, New Delhi - 110033
#09958818853
ekta.j...@teri.res.in
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