Hi KT,
This is caused by another problem. Your system blew up. Check messages
before this one, and check the log for LINCS warnings.
Cheers,
Tsjerk
On Thu, Jan 24, 2013 at 9:11 AM, Kieu Thu Nguyen <kieuthu2...@gmail.com>wrote:
> Dear All,
>
> My MD simulation has an error
>
> Warning: Only triclinic boxes with the first vector parallel to the x-axis
> and the second vector in the xy-plane are supported.
> Box (3x3):
> Box[ 0]={ nan, nan, nan}
> Box[ 1]={ nan, nan, nan}
> Box[ 2]={ nan, nan, nan}
> Can not fix pbc.
>
> I searched on Gromacs-errors web, but i did not see this error.
> How can i fix it ?
>
> Thanks and regards,
> KT
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--
Tsjerk A. Wassenaar, Ph.D.
post-doctoral researcher
Biocomputing Group
Department of Biological Sciences
2500 University Drive NW
Calgary, AB T2N 1N4
Canada
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