State_prev.cpt is the previous check point file to state.cpt. Usually the check point file generates for every 15 mins. You can use the state_prev.cpt because your state.cpt has no data (0 bytes)
On Mon, Nov 12, 2012 at 11:54 AM, ananyachatterjee < ananyachatter...@iiserkol.ac.in> wrote: > Hi all, > > I have restarted my simulation stopped due to power failure by using the > command: > > mdrun -s md.tpr -cpi state.cpt -append > > And now I am getting the following error: > > Program mdrun, VERSION 4.0.7 > Source code file: ../../../../src/gmxlib/**checkpoint.c, line: 547 > > Fatal error: > The checkpoint file is empty/corrupted, or maybe you are out of quota? > > can any one help in this regards. > > I have two .cpt files one state.cpt (0 bytes) and another state_prev.cpt > file(5.4 MB). Should I have to use state_prev.cpt file to restart the > simulation? > > > On Mon, 12 Nov 2012 11:37:02 +0530, Kavyashree M wrote: > >> Hi Ananya, >> >> You can refer this. >> >> http://www.gromacs.org/**Documentation/How-tos/Doing_** >> Restarts?highlight=restarting<http://www.gromacs.org/Documentation/How-tos/Doing_Restarts?highlight=restarting> >> >> bye >> kavya >> On Mon, Nov 12, 2012 at 11:27 AM, ananyachatterjee < >> ananyachatter...@iiserkol.ac.**in <ananyachatter...@iiserkol.ac.in>> >> wrote: >> >> >>> Hi all, >>> >>> my simulation has stopped due to power failure, can anyone tell me how to >>> restart it from the same point. >>> -- >>> Ananya Chatterjee, >>> >>> -- >>> gmx-users mailing list gmx-users@gromacs.org >>> >>> http://lists.gromacs.org/****mailman/listinfo/gmx-users<http://lists.gromacs.org/**mailman/listinfo/gmx-users> >>> <htt**p://lists.gromacs.org/mailman/**listinfo/gmx-users<http://lists.gromacs.org/mailman/listinfo/gmx-users> >>> > >>> * Please search the archive at http://www.gromacs.org/** >>> >>> Support/Mailing_Lists/Search<h**ttp://www.gromacs.org/Support/** >>> Mailing_Lists/Search<http://www.gromacs.org/Support/Mailing_Lists/Search>>before >>> posting! >>> * Please don't post (un)subscribe requests to the list. Use the www >>> interface or send it to gmx-users-requ...@gromacs.org. >>> * Can't post? Read >>> http://www.gromacs.org/****Support/Mailing_Lists<http://www.gromacs.org/**Support/Mailing_Lists> >>> <http://**www.gromacs.org/Support/**Mailing_Lists<http://www.gromacs.org/Support/Mailing_Lists> >>> > >>> >>> > -- > Ananya Chatterjee, > Senior Research Fellow (SRF), > Department of biological Science, > IISER-Kolkata. > > -- > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/**mailman/listinfo/gmx-users<http://lists.gromacs.org/mailman/listinfo/gmx-users> > * Please search the archive at http://www.gromacs.org/** > Support/Mailing_Lists/Search<http://www.gromacs.org/Support/Mailing_Lists/Search>before > posting! > * Please don't post (un)subscribe requests to the list. Use the www > interface or send it to gmx-users-requ...@gromacs.org. > * Can't post? Read > http://www.gromacs.org/**Support/Mailing_Lists<http://www.gromacs.org/Support/Mailing_Lists> > -- With Best Wishes Venkat Reddy Chirasani PhD student Laboratory of Computational Biophysics Department of Biotechnology IIT Madras Chennai INDIA-600036 -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
