On 11/5/12 7:43 AM, akn wrote:
Dear gmx users,
I want to compute the angle between two groups. I used g_sgangle -s
topol.tpr -f conf.gro -n index.ndx -oa sg_angle.xvg.
As I understand the first column refer to time and the second refer to
angle. What does the thrid column refer to in xvg file?
@ xaxis label "Time (ps)"
@ yaxis label "Angle (degrees)"
@TYPE xy
0 1 0.0197823
0.05 1 0
0.1 1 0
0.15 1 0.0197823
0.2 1 0
Can you give an answer, please?
It is the cosine of the angle.
-Justin
--
========================================
Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
========================================
--
gmx-users mailing list gmx-users@gromacs.org
http://lists.gromacs.org/mailman/listinfo/gmx-users
* Please search the archive at
http://www.gromacs.org/Support/Mailing_Lists/Search before posting!
* Please don't post (un)subscribe requests to the list. Use the
www interface or send it to gmx-users-requ...@gromacs.org.
* Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
