Dear All, I am using AMBER94 force-field for my protein. In the original force field paper the dihedral functional form has been given as (V/2)[ 1 + cos(nPhi - gamma)] but in GROMACS(4.5.4) manual I see the (1/2) factor is not there [ eq 4.62]. So is this internally handled in GROMACS or should I worry about this half-factor ?
Can anyone inform me the functional forms for proper dihedral types '1' , '4' and '9'. If I understand correctly the functional form which I have mentioned earlier is of type '9'. Thanks in advance. -- Tarak -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Only plain text messages are allowed! * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
