Hi Justin, I did indeed correct for periodic boundary conditions prior to running rmsf, so I'm not sure what the problem would be there.
Is there any way of producing an average structure from rmsf (or any other program for that matter) that is not output as a .pdb file but as a .tpr file? Thanks, Tom -- View this message in context: http://gromacs.5086.n6.nabble.com/RMSF-error-when-fitting-to-average-structure-tp5000251p5000258.html Sent from the GROMACS Users Forum mailing list archive at Nabble.com. -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Only plain text messages are allowed! * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
