Hi everybody, I want to put my protein in the box with editconf but when I look at it it is always at the border of the box and not at the center. I tried it with those two commands:
editconf -f 3m71.gro -o 3m71_box.gro -center 4.59340 4.59470 5.17330 -c -bt dodecahedron -d 1.0 2>>logErr 1>>logOut editconf -f 3m71.gro -o 3m71_box.gro -c -bt dodecahedron -d 1.0 2>>logErr 1>>logOut With the first command it is at the upper border and with the second command it is at the right border. The coordinates of the firs command are from the 3m71.gro file. Can you please tell me what is wrong? Thank you, Eva -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Only plain text messages are allowed! * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
