On 6/16/12 9:06 AM, delara aghaie wrote:
Dear Justin
Ok,
I looked at gmxcheck help. There is an option to have output in latex format
  -m        doc.tex  Output, Opt. LaTeX file
so I used this command line:
gmxcheck -s1 nvt.tpr -s2 npt.tpr -m doc.tex
  again I could see result on the screen but the expected doc.tex file did not
come out?


When supplying both -s1 and -s2 (or other combinations like -f and -f2), you're telling gmxcheck to compare files. If you want a .tex file printed out, you need to analyze only one .tpr file.

-Justin

--
========================================

Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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