On 6/16/12 7:41 AM, francesca vitalini wrote:
Dear Justin,
this is my trjcat command
/home/cocktail/vitalini/gromacs_special/bin/trjcat -f
/home/cocktail2/vitalini/reverse_transformation_vacuum/300-65-100/300-65-100_annealing.gro
/home/cocktail2/vitalini/reverse_transformation_vacuum/300-65-100/300-65-100_annealing2.gro
/home/cocktail2/vitalini/reverse_transformation_vacuum/300-65-100/300-65-100_min.gro
/home/cocktail2/vitalini/reverse_transformation_vacuum/300-65-100/300-65-100_min1.gro
-o
/home/cocktail2/vitalini/reverse_transformation_vacuum/300-65-100/300-65-100_traj_tot.xtc
-settime -cat
I'm using the settime command to have each structure at a different time step.
If I was using it wrongly please correct me.
You should be prompted to then set a time value for each frame, is that not the
case?
-Justin
--
========================================
Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
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