i am using the tutorial KALP15 in DPPC for my protein in bilipid membrane SIMULATION.
i have reached Step Three: Defining the Unit Cell & Adding Solvent where i hav to pack the lipids around the protein using InflateGro. how do i start using inflategro? my last step was : to generate this new position restraint file using genrestr: genrestr -f KALP_newbox.gro -o strong_posre.itp -fc 100000 100000 100000 After which ,In the .mdp file used for the minimizations, i added a line "define = -DSTRONG_POSRES" to make use of these new position restraints. when i next gave the command :perl inflategro.pl system.gro 4 DPPC 14 system_inflated.gro 5 area.dat ERROR Can't open perl script "inflategro.pl": No such file or directory WHAT SHOULD I DO??? -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
