Dear all gromacs users, While i am running pdb2gmx commond i am getting following error.
Fatal error: There were 22 missing atoms in molecule Protein_chain_A, if you want to use this incomplete topology. I wont ignore the 22 missing atoms by using -missing commond. I would like to construct a complete protein structure.But i dont know how to construct the complete protein sturcture.Kindly tell me how to consturct the complete protein and what are the softwares i have to use here. Suryanarayana Seera, PhD student, Hyderabad, India.
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