Hi, what output does g_tune_pme provide? What is in "log" and in "perf.out"? Can it find the correct mdrun / mpirun executables?
Carsten On Apr 26, 2012, at 9:28 AM, Albert wrote: > Hello: > Does anybody have any idea how to run g_tune_pme in a cluster? I tried many > times with following command: > > g_tune_pme_d -v -s npt_01.tpr -o npt_01.trr -cpo npt_01.cpt -g npt_01.log > -launch -nt 24 > log & > > but it always failed. > > > Option Type Value Description > ------------------------------------------------------ > -[no]h bool no Print help info and quit > -[[CUDANodeA:03384] [[60523,1],22] ORTE_ERROR_LOG: A message is attempting to > be sent to a process whose contact information is unknown in file > rml_oob_send.c at line 105 > [CUDANodeA:03384] [[60523,1],22] could not get route to [[INVALID],INVALID] > [CUDANodeA:03384] [[60523,1],22] ORTE_ERROR_LOG: A message is attempting to > be sent to a process whose contact information is unknown in file > base/plm_base_proxy.c at line 86 > > -- > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > Please don't post (un)subscribe requests to the list. Use the www interface > or send it to gmx-users-requ...@gromacs.org. > Can't post? Read http://www.gromacs.org/Support/Mailing_Lists -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
