On 22/04/2012 12:00 AM, Shima Arasteh wrote:
Dear Gomacs friends,

I'd like to know if it makes different in the last outcomes of a simulation when I change the box?

Yes, it changes.

For example I use dodecahedron instead of cubic one. I just know that I need to add less numbers of water molecules.

True. It's your call based on what you want to simulate.

Mark
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