Hello all I am new for gromacs. I have to do MD simulation of membrane protein docked with organic molecule. I have gerated top and itp for ligand using PRODRG server also generated top file for complex. But when I am generating .tpr file for a POPC system using grompp getting an error:
creating statusfile for 1 node... checking input for internal consistency... calling /lib/cpp... processing topology... Cleaning up temporary file gromppWQnjOb Fatal error: Bond atom type names can't be single digits. I am using gromacs-4.5.5 Can someone help me to find out where is actually problem is occuring? With regards Sangita Kachhap SRF BIC,IMTECH CHANDIGARH ______________________________________________________________________ सूक्ष्मजीव प्रौद्योगिकी संस्थान (वैज्ञानिक औद्योगिक अनुसंधान परिषद) Institute of Microbial Technology (A CONSTITUENT ESTABLISHMENT OF CSIR) सैक्टर 39 ए, चण्डीगढ़ / Sector 39-A, Chandigarh पिन कोड/PIN CODE :160036 दूरभाष/EPABX :0172 6665 201-202 -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
