Thank you very much! Sorry , solid wall for me is distance between the solute
and the box!
Best wishes!
At 2012-04-06 16:42:02,"David van der Spoel" <sp...@xray.bmc.uu.se> wrote:
Op 6 apr 2012 om 10:30 heeft "Xianwei Wang" <wangxianwei1...@163.com> het
volgende geschreven:
Thank you for your answer! But if electric field was screened by the outside
water in the box ,how I decide the size of electric field in the protein when I
used "E_x = 1.0 0.71e-2 0" and solute wall distance of 1 nm?
Best wishes!
yours Xianwei Wang
Approximately divided by 80. Don't know what you mean with solid wall.
At 2012-04-06 14:53:58,"David van der Spoel" <sp...@xray.bmc.uu.se> wrote:
Op 6 apr 2012 om 07:44 heeft "Xianwei Wang" <wangxianwei1...@163.com> het
volgende geschreven:
Dear gmx users:
I would like to apply electric field to my simulation box, and I have
added these to my input file:
; Format is number of terms (int) and for all terms an amplitude (real) =
; and a phase angle (real) =
E_x = 1.0 0.71e-2 0
What I want to know is whether the size of this electric field in my protein
inside the box will be screened by the water around the protein?
Yes. Water had high epsilon(0)
Best wishes!
--
gmx-users mailing list gmx-users@gromacs.org
http://lists.gromacs.org/mailman/listinfo/gmx-users
Please search the archive at
http://www.gromacs.org/Support/Mailing_Lists/Search before posting!
Please don't post (un)subscribe requests to the list. Use the
www interface or send it to gmx-users-requ...@gromacs.org.
Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
--
gmx-users mailing list gmx-users@gromacs.org
http://lists.gromacs.org/mailman/listinfo/gmx-users
Please search the archive at
http://www.gromacs.org/Support/Mailing_Lists/Search before posting!
Please don't post (un)subscribe requests to the list. Use the
www interface or send it to gmx-users-requ...@gromacs.org.
Can't post? Read http://www.gromacs.org/Support/Mailing_Lists--
gmx-users mailing list gmx-users@gromacs.org
http://lists.gromacs.org/mailman/listinfo/gmx-users
Please search the archive at
http://www.gromacs.org/Support/Mailing_Lists/Search before posting!
Please don't post (un)subscribe requests to the list. Use the
www interface or send it to gmx-users-requ...@gromacs.org.
Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
