hello sir, Thanks for your kind reply...
my extended simulation for additional 10ns is completed and when i analysed its rmsd its showing random variation.. i am trying to form micelle.. maybe this is the reason for this random variation... suppose if i extend my simulation further, maybe is it possible to get flat rmsd??? what maybe the cause for this random variation in rmsd..its varying between 2.1 to 2.5nm.. please help me with your answer.. Thanking you.
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