On 7/02/2012 10:52 PM, Anushree Tripathi wrote:
How to change parameters of JZ4 topology (as given in tutorial).I
think the explaination is given in the article (
Practical Considerations for Building GROMOS-Compatible Small-Molecule
Topologies) which is not freely available.Please help me.
The standard advice is here
http://www.gromacs.org/Documentation/How-tos/Parameterization. You
should approach the authors with questions about their building tool works.
You should seriously consider the advice on the above link about
parameterization and an experienced user.
Mark
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