On Friday 03,February,2012 09:56 PM, francesca vitalini wrote:
Yes but those tips are not for bash scripts... :(

You'd better post what you have done so far about this script,

probably someone can help you improve or refine it.





2012/2/3 Mark Abraham <mark.abra...@anu.edu.au
<mailto:mark.abra...@anu.edu.au>>

    On 4/02/2012 12:21 AM, francesca vitalini wrote:

        Hi!
        I have to use the gromacs command trjconv to obtain a .gro file
        from a .xtc and a .pdb file. I have to do it for several files
        in a bash for loop so I'd rather prefer to find a way to make my
        script type in the trjconv interactive terminal always the same
        number for the system. Any tips?


    Check out
    http://www.gromacs.org/__Documentation/How-tos/Using___Commands_in_Scripts
    <http://www.gromacs.org/Documentation/How-tos/Using_Commands_in_Scripts>

    Mark

    --
    gmx-users mailing list gmx-users@gromacs.org
    <mailto:gmx-users@gromacs.org>
    http://lists.gromacs.org/__mailman/listinfo/gmx-users
    <http://lists.gromacs.org/mailman/listinfo/gmx-users>
    Please search the archive at
    http://www.gromacs.org/__Support/Mailing_Lists/Search
    <http://www.gromacs.org/Support/Mailing_Lists/Search> before posting!
    Please don't post (un)subscribe requests to the list. Use the www
    interface or send it to gmx-users-requ...@gromacs.org
    <mailto:gmx-users-requ...@gromacs.org>.
    Can't post? Read http://www.gromacs.org/__Support/Mailing_Lists
    <http://www.gromacs.org/Support/Mailing_Lists>



--
gmx-users mailing list    gmx-users@gromacs.org
http://lists.gromacs.org/mailman/listinfo/gmx-users
Please search the archive at 
http://www.gromacs.org/Support/Mailing_Lists/Search before posting!
Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org.
Can't post? Read http://www.gromacs.org/Support/Mailing_Lists

Reply via email to