Dear Gromacs Users! I'm looking for some tutorial for the example of the biased MD driven by appication of the external forces.
For example I have simple system wich consist of the peptide (small membrane chanell) in vacum where I study effect of some point mutations on the tight packing (primarily vdv interactions) in that peptide. In more detailes I want to investigate stability of the mutated peptide by introducing of the motion of some functional relevant rotameric swithes. So I'm looking for possibility to apply of external forces on that rotameric switches. James
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