Anushree Tripathi wrote:
/I am using gromacs 4.5.3 version and I am trying to follow the tutorials. For
// starting I am following the *KALP15 in DPPC*
// tutorial(http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin/gmx-tutorials/membrane_protein/02_topology.html).
// But I am unable to locate following files in the Gromacs folder ..
//
// aminoacids.rtp
//aminoacids.hdb
//aminoacids.c.tdb
// aminoacids.n.tdb
// aminoacids.r2b
//aminoacids.vsd
// ff_dum.itp
// ffnonbonded.itp
// ffbonded.itp
// forcefield.itp
// ions.itp
//
// spc.itp
// watermodels.dat
//
//
// Please suggest me where can I find the following files./
They are in $GMXLIB/gromos53a6.ff, where $GMXLIB is the /share/gromacs/top
subdirectory of your Gromacs installation.
-Justin
--
========================================
Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
========================================
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