Hi, have you tried to see the graphic with xmgrace using the flag "-nxy"? I had
the same problem my first time.
Best regards.
________________________________
De: "Poojari, Chetan" <c.pooj...@fz-juelich.de>
Para: "gmx-users@gromacs.org" <gmx-users@gromacs.org>
Enviado: lunes 21 de noviembre de 2011 15:42
Asunto: [gmx-users] g_helixorient
Hi,
I have a peptide inserted in membrane would like to analyze the peptide tilt.
The command i have used to do this is :
g_helixorient -s .tpr -f .xtc -n .ndx -otilt
Index file contains all carbon alpha atoms of the helix.
When i plot the tilt.xvg in xmgrace, i simply cannot obtain anything more than
zero line graphic.
My tilt.xvg file contains:
20 0 6.71663331985 7.67159080505
7.11331129074 6.48267745972 6.50307703018 3.75021958351
3.11895847321 4.27641773224 4.94620418549 6.23851776123
7.12995672226 13.8778572083 53.7828483582 151.92010498
19.5190696716 15.4049606323 19.654499054 0
40 0 13.8856639862 8.50883388519
3.26247763634 5.69738864899 13.2208509445 17.3268871307
15.3818006516 14.5039892197 15.0511980057 15.6195802689
13.389333725 9.22294712067 50.3538093567 170.862670898
45.268119812 47.6134376526 48.8991851807 0
.
.
.
.
.
Please can i know what might have gone wrong.
Kind Regards,
Chetan.
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