---------- Forwarded message ---------- From: swati patel <swatipatel...@gmail.com> Date: Sat, Nov 19, 2011 at 3:18 PM Subject: afm simulation To: Discussion list for GROMACS users <gmx-users@gromacs.org>
Hello Justin, I am following your tutorial on umbrella sampling.My project is on afm simulation of streptavidin-biotin complex.Till index.idx i ve created all my files.But as per your tutorial you have discussed of frames extraction and configurations.Since i am dealing with pull afm,so do I also need to extract frames and generate configuration ?? Please tell me about the next step after doing npt equlibration and generating index.idx files? Thanx
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