helo justin, yess since i am dealing with a complex,so i generated protein topology using gromos96 43a1 force fields and for ligands,obtained topology using PRODRG which uses gromos 87 force fields.
How to obtain similar force fields topologies since PRODRG only works with gromos87 force fields and in gromacs i choosed optipn (9)i.e.gromos 96 force fields.?? thanx.
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