> Dear Gromacs Users! > > > I'd like to know about external software wich could be used for structure > processing for the futher simulation in Gromacs. Today I've tried one of the > most popular such software Amber tools but I've forced with problems during > compilation of it ") So I'm looking for possible analogues ) > > First of all I'm intresting in software for the addition different CAPing > groups to N and C termi of my protein. > > Is there any plugins for Pymol or VMD for such purposes? I've loked for this > option in both of that software but couldnot find > > > Thank you for your help, > > James
Among free solutions... maybe this would help: http://www.chemaxon.com/marvin/sketch/index.php I don't know molecular editor plugins for VMD, but it would be cool, if one is accessible. -- Dr. Vitaly V. Chaban, 430 Hutchison Hall, Chem. Dept. Univ. Rochester, Rochester, New York 14627-0216 THE UNITED STATES OF AMERICA -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
